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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Hpr1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

THO complex 1.8182E-6 4 4 2 6292
fungal-type vacuole lumen 4.4437E-3 4 7 1 6292
Cdc73/Paf1 complex 5.0773E-3 4 8 1 6292
vacuolar lumen 5.7106E-3 4 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA elongation from RNA polymerase II promoter 2.2288E-4 4 39 2 6292
RNA elongation 2.974E-4 4 45 2 6292
cellular response to stress 3.7451E-4 4 290 3 6292
mRNA transport 6.8098E-4 4 68 2 6292
mRNA export from nucleus 6.8098E-4 4 68 2 6292
cellular response to stimulus 8.288E-4 4 379 3 6292
RNA export from nucleus 9.4222E-4 4 80 2 6292
RNA transport 9.6587E-4 4 81 2 6292
nucleic acid transport 9.6587E-4 4 81 2 6292
establishment of RNA localization 9.6587E-4 4 81 2 6292
RNA localization 1.2449E-3 4 92 2 6292
nucleobase, nucleoside, nucleotide and nucleic acid transport 1.355E-3 4 96 2 6292
nuclear export 1.5586E-3 4 103 2 6292
response to stress 1.8449E-3 4 497 3 6292
activation of MAPKK activity involved in osmosensory signaling pathway 1.9063E-3 4 3 1 6292
DNA recombination 1.9066E-3 4 114 2 6292
nuclear transport 2.4736E-3 4 130 2 6292
nucleocytoplasmic transport 2.4736E-3 4 130 2 6292
activation of MAPKK activity 3.1756E-3 4 5 1 6292
activation of protein kinase activity 3.1756E-3 4 5 1 6292
positive regulation of protein kinase activity 5.0773E-3 4 8 1 6292
positive regulation of kinase activity 5.0773E-3 4 8 1 6292
positive regulation of transferase activity 5.0773E-3 4 8 1 6292
response to stimulus 6.5381E-3 4 766 3 6292
MAPKKK cascade involved in osmosensory signaling pathway 8.2408E-3 4 13 1 6292
vacuolar protein catabolic process 8.8726E-3 4 14 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

serine-type endopeptidase activity 2.5411E-3 4 4 1 6292
serine-type peptidase activity 3.8098E-3 4 6 1 6292
MAP kinase kinase kinase activity 3.8098E-3 4 6 1 6292
serine hydrolase activity 8.2408E-3 4 13 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle