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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Yil079c. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

TRAMP complex 4.5436E-6 6 4 2 6292
heterogeneous nuclear ribonucleoprotein complex 2.8585E-3 6 3 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

tRNA catabolic process 4.5436E-6 6 4 2 6292
snRNA catabolic process 7.5694E-6 6 5 2 6292
snoRNA catabolic process 7.5694E-6 6 5 2 6292
ncRNA polyadenylation 1.1349E-5 6 6 2 6292
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process 1.1349E-5 6 6 2 6292
rRNA catabolic process 1.1349E-5 6 6 2 6292
ncRNA catabolic process 1.1349E-5 6 6 2 6292
polyadenylation-dependent RNA catabolic process 2.1167E-5 6 8 2 6292
polyadenylation-dependent ncRNA catabolic process 2.1167E-5 6 8 2 6292
mRNA transport 2.3597E-5 6 68 3 6292
mRNA export from nucleus 2.3597E-5 6 68 3 6292
snRNA metabolic process 2.7204E-5 6 9 2 6292
RNA export from nucleus 3.8518E-5 6 80 3 6292
RNA transport 3.9986E-5 6 81 3 6292
nucleic acid transport 3.9986E-5 6 81 3 6292
establishment of RNA localization 3.9986E-5 6 81 3 6292
ncRNA 3'-end processing 4.981E-5 6 12 2 6292
RNA localization 5.862E-5 6 92 3 6292
nucleobase, nucleoside, nucleotide and nucleic acid transport 6.66E-5 6 96 3 6292
nuclear export 8.2226E-5 6 103 3 6292
snoRNA metabolic process 1.1517E-4 6 18 2 6292
nuclear transport 1.6472E-4 6 130 3 6292
nucleocytoplasmic transport 1.6472E-4 6 130 3 6292
RNA polyadenylation 2.4382E-4 6 26 2 6292
RNA 3'-end processing 6.4156E-4 6 42 2 6292
RNA catabolic process 2.3169E-3 6 80 2 6292
RNA processing 3.811E-3 6 380 3 6292
macromolecule localization 4.3197E-3 6 397 3 6292
tRNA metabolic process 5.1463E-3 6 120 2 6292
poly(A)+ mRNA export from nucleus 6.6592E-3 6 7 1 6292
rRNA metabolic process 6.6661E-3 6 137 2 6292
DNA topological change 7.6075E-3 6 8 1 6292
modification-dependent macromolecule catabolic process 9.4541E-3 6 164 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

polynucleotide adenylyltransferase activity 1.1349E-5 6 6 2 6292
adenylyltransferase activity 5.8841E-5 6 13 2 6292
IMP dehydrogenase activity 2.8585E-3 6 3 1 6292
poly(A) RNA binding 4.7604E-3 6 5 1 6292
single-stranded RNA binding 4.7604E-3 6 5 1 6292
poly-purine tract binding 4.7604E-3 6 5 1 6292
nucleotidyltransferase activity 9.9054E-3 6 168 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle