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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Isw2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin remodeling complex 7.2776E-4 3 99 2 6292
chromatin accessibility complex 1.9063E-3 3 4 1 6292
ISWI complex 1.9063E-3 3 4 1 6292
ISW1 complex 1.9063E-3 3 4 1 6292
nuclear part 5.3751E-3 3 1103 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin remodeling 3.4288E-4 3 68 2 6292
pore complex assembly 4.768E-4 3 1 1 6292
nuclear pore complex assembly 4.768E-4 3 1 1 6292
nucleosome positioning 1.4299E-3 3 3 1 6292
negative regulation of transcription from RNA polymerase II promoter by pheromones 1.9063E-3 3 4 1 6292
negative regulation of gene-specific transcription from RNA polymerase II promoter 1.9063E-3 3 4 1 6292
negative regulation of gene-specific transcription 1.9063E-3 3 4 1 6292
negative regulation of transcription by pheromones 1.9063E-3 3 4 1 6292
chromatin modification 2.089E-3 3 168 2 6292
chromatin organization 3.0416E-3 3 203 2 6292
gene-specific transcription from RNA polymerase II promoter 4.7611E-3 3 10 1 6292
regulation of transcription by pheromones 4.7611E-3 3 10 1 6292
regulation of transcription from RNA polymerase II promoter by pheromones 4.7611E-3 3 10 1 6292
cellular response to pheromone 4.7611E-3 3 10 1 6292
regulation of gene-specific transcription from RNA polymerase II promoter 4.7611E-3 3 10 1 6292
cellular macromolecular complex subunit organization 4.9265E-3 3 259 2 6292
organelle organization 5.734E-3 3 1127 3 6292
regulation of gene-specific transcription 7.136E-3 3 15 1 6292
chromatin assembly 9.0332E-3 3 19 1 6292
macromolecular complex subunit organization 9.2699E-3 3 357 2 6292
cellular response to organic substance 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATPase activity 3.2839E-3 3 211 2 6292
protein transmembrane transporter activity 4.2857E-3 3 9 1 6292
macromolecule transmembrane transporter activity 4.2857E-3 3 9 1 6292
nucleoside-triphosphatase activity 7.8952E-3 3 329 2 6292
hydrolase activity, acting on acid anhydrides 9.067E-3 3 353 2 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.067E-3 3 353 2 6292
pyrophosphatase activity 9.067E-3 3 353 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle