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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Prp6. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

U4/U6 x U5 tri-snRNP complex 1.1953E-7 3 32 3 6292
small nuclear ribonucleoprotein complex 9.5698E-7 3 63 3 6292
ribonucleoprotein complex 5.4224E-4 3 514 3 6292
nuclear part 5.3751E-3 3 1103 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear mRNA splicing, via spliceosome 3.7798E-6 3 99 3 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.8967E-6 3 100 3 6292
RNA splicing, via transesterification reactions 4.7832E-6 3 107 3 6292
RNA splicing 9.0288E-6 3 132 3 6292
mRNA processing 1.4956E-5 3 156 3 6292
mRNA metabolic process 3.8268E-5 3 213 3 6292
RNA processing 2.1865E-4 3 380 3 6292
RNA metabolic process 3.4763E-3 3 954 3 6292
gene expression 8.4626E-3 3 1283 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle