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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

methionine biosynthetic process 2.859E-3 2 9 1 6292
pentose-phosphate shunt 3.811E-3 2 12 1 6292
sulfur amino acid biosynthetic process 4.4455E-3 2 14 1 6292
NADPH regeneration 4.7627E-3 2 15 1 6292
NADP metabolic process 5.7138E-3 2 18 1 6292
aspartate family amino acid biosynthetic process 7.2981E-3 2 23 1 6292
methionine metabolic process 7.6148E-3 2 24 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 3.1786E-4 2 1 1 6292
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 3.1786E-4 2 1 1 6292
transketolase activity 6.3568E-4 2 2 1 6292
S-methyltransferase activity 1.5888E-3 2 5 1 6292
transferase activity, transferring aldehyde or ketonic groups 2.224E-3 2 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle