From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
Notes: | From the published set of protein complexes (core proteins only) |
Complex Size: | 5 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nucleolus | 5.9889E-6 | 5 | 211 | 4 | 6292 |
nuclear outer membrane | 2.4177E-5 | 5 | 86 | 3 | 6292 |
nuclear membrane | 3.4739E-5 | 5 | 97 | 3 | 6292 |
nuclear lumen | 1.2511E-4 | 5 | 453 | 4 | 6292 |
outer membrane | 2.1352E-4 | 5 | 178 | 3 | 6292 |
organelle outer membrane | 2.1352E-4 | 5 | 178 | 3 | 6292 |
nuclear envelope | 2.9737E-4 | 5 | 199 | 3 | 6292 |
nuclear membrane-endoplasmic reticulum network | 4.6842E-4 | 5 | 232 | 3 | 6292 |
organelle lumen | 5.503E-4 | 5 | 660 | 4 | 6292 |
intracellular organelle lumen | 5.503E-4 | 5 | 660 | 4 | 6292 |
membrane-enclosed lumen | 6.9283E-4 | 5 | 700 | 4 | 6292 |
box C/D snoRNP complex | 1.5888E-3 | 5 | 2 | 1 | 6292 |
endomembrane system | 2.2823E-3 | 5 | 398 | 3 | 6292 |
non-membrane-bounded organelle | 2.3579E-3 | 5 | 959 | 4 | 6292 |
intracellular non-membrane-bounded organelle | 2.3579E-3 | 5 | 959 | 4 | 6292 |
nuclear part | 4.0435E-3 | 5 | 1103 | 4 | 6292 |
envelope | 4.5459E-3 | 5 | 505 | 3 | 6292 |
organelle envelope | 4.5459E-3 | 5 | 505 | 3 | 6292 |
membrane part | 9.8527E-3 | 5 | 662 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ribosome biogenesis | 4.3019E-5 | 5 | 346 | 4 | 6292 |
ribonucleoprotein complex biogenesis | 5.8585E-5 | 5 | 374 | 4 | 6292 |
cellular component biogenesis | 6.6989E-4 | 5 | 694 | 4 | 6292 |
rRNA processing | 3.9447E-3 | 5 | 128 | 2 | 6292 |
rRNA metabolic process | 4.5082E-3 | 5 | 137 | 2 | 6292 |
isoprenoid metabolic process | 4.7604E-3 | 5 | 6 | 1 | 6292 |
isoprenoid biosynthetic process | 4.7604E-3 | 5 | 6 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ATP-dependent RNA helicase activity | 1.8942E-4 | 5 | 28 | 2 | 6292 |
RNA-dependent ATPase activity | 2.0338E-4 | 5 | 29 | 2 | 6292 |
RNA helicase activity | 4.2953E-4 | 5 | 42 | 2 | 6292 |
ATP-dependent helicase activity | 5.6165E-4 | 5 | 48 | 2 | 6292 |
purine NTP-dependent helicase activity | 5.6165E-4 | 5 | 48 | 2 | 6292 |
diphosphomevalonate decarboxylase activity | 7.9466E-4 | 5 | 1 | 1 | 6292 |
helicase activity | 1.6756E-3 | 5 | 83 | 2 | 6292 |
ATPase activity, coupled | 5.3152E-3 | 5 | 149 | 2 | 6292 |