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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolar ribonuclease P complex 9.7705E-19 6 9 6 6292
multimeric ribonuclease P complex 9.7705E-19 6 9 6 6292
ribonuclease MRP complex 2.4426E-18 6 10 6 6292
ribonuclease P complex 2.4426E-18 6 10 6 6292
nucleolar part 9.4739E-14 6 45 6 6292
small nucleolar ribonucleoprotein complex 1.8173E-12 6 72 6 6292
nucleolus 1.3269E-9 6 211 6 6292
nuclear lumen 1.3504E-7 6 453 6 6292
ribonucleoprotein complex 2.8931E-7 6 514 6 6292
organelle lumen 1.3052E-6 6 660 6 6292
intracellular organelle lumen 1.3052E-6 6 660 6 6292
membrane-enclosed lumen 1.8602E-6 6 700 6 6292
non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
intracellular non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
nuclear part 2.8697E-5 6 1103 6 6292
macromolecular complex 3.0579E-4 6 1635 6 6292
nucleus 1.1592E-3 6 2041 6 6292
organelle part 2.2664E-3 6 2282 6 6292
intracellular organelle part 2.2664E-3 6 2282 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA cleavage 2.0599E-15 6 25 6 6292
nucleic acid phosphodiester bond hydrolysis 1.0895E-13 6 46 6 6292
tRNA processing 4.3903E-12 6 83 6 6292
tRNA metabolic process 4.2487E-11 6 120 6 6292
rRNA processing 6.3085E-11 6 128 6 6292
rRNA metabolic process 9.5593E-11 6 137 6 6292
mRNA processing 2.1125E-10 6 156 6 6292
mRNA metabolic process 1.4052E-9 6 213 6 6292
ncRNA processing 1.4872E-9 6 215 6 6292
ncRNA metabolic process 4.3891E-9 6 257 6 6292
ribosome biogenesis 2.6536E-8 6 346 6 6292
ribonucleoprotein complex biogenesis 4.2465E-8 6 374 6 6292
RNA processing 4.675E-8 6 380 6 6292
cellular component biogenesis 1.7662E-6 6 694 6 6292
RNA metabolic process 1.1988E-5 6 954 6 6292
gene expression 7.1216E-5 6 1283 6 6292
nucleic acid metabolic process 1.283E-4 6 1415 6 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 2.3599E-4 6 1566 6 6292
cellular nitrogen compound metabolic process 4.9256E-4 6 1770 6 6292
nitrogen compound metabolic process 5.2873E-4 6 1791 6 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonuclease P activity 2.4426E-18 6 10 6 6292
ribonuclease MRP activity 2.4426E-18 6 10 6 6292
tRNA-specific ribonuclease activity 5.8216E-17 6 15 6 6292
endoribonuclease activity, producing 5'-phosphomonoesters 2.1593E-16 6 18 6 6292
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.1742E-15 6 23 6 6292
endoribonuclease activity 3.443E-15 6 27 6 6292
endonuclease activity 6.4584E-13 6 61 6 6292
ribonuclease activity 1.5964E-10 6 149 6 6292
nuclease activity 9.2978E-10 6 199 6 6292
hydrolase activity, acting on ester bonds 2.4301E-8 6 341 6 6292
hydrolase activity 9.0834E-6 6 911 6 6292
catalytic activity 1.5845E-3 6 2150 6 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle