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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar large ribosomal subunit 5.3584E-10 7 50 5 6292
mitochondrial large ribosomal subunit 5.3584E-10 7 50 5 6292
organellar ribosome 1.0997E-8 7 90 5 6292
mitochondrial ribosome 1.0997E-8 7 90 5 6292
large ribosomal subunit 3.046E-8 7 110 5 6292
mitochondrial matrix 3.2489E-7 7 176 5 6292
mitochondrial lumen 3.2489E-7 7 176 5 6292
ribosomal subunit 3.9497E-7 7 183 5 6292
ribosome 3.9127E-6 7 290 5 6292
mitochondrial part 4.4406E-5 7 475 5 6292
ribonucleoprotein complex 6.5267E-5 7 514 5 6292
non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
intracellular non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
organelle lumen 2.1944E-4 7 660 5 6292
intracellular organelle lumen 2.1944E-4 7 660 5 6292
membrane-enclosed lumen 2.9135E-4 7 700 5 6292
mitochondrion 2.7647E-3 7 1125 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.411E-5 7 376 5 6292
cellular protein metabolic process 2.2261E-3 7 1074 5 6292
protein metabolic process 2.8929E-3 7 1136 5 6292
cellular macromolecule biosynthetic process 3.5479E-3 7 1187 5 6292
macromolecule biosynthetic process 3.5757E-3 7 1189 5 6292
gene expression 5.0816E-3 7 1283 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 8.2387E-7 7 212 5 6292
structural molecule activity 8.4682E-6 7 339 5 6292
sterol 3-beta-glucosyltransferase activity 1.1125E-3 7 1 1 6292
peptidyltransferase activity 3.3344E-3 7 3 1 6292
transferase activity, transferring amino-acyl groups 5.552E-3 7 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle