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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasome core complex 1.4818E-19 7 16 7 6292
proteasome complex 9.5369E-16 7 48 7 6292
proteasome core complex, alpha-subunit complex 1.8755E-11 7 7 4 6292
proteasome core complex, beta-subunit complex 2.9465E-8 7 7 3 6292
protein complex 6.1975E-6 7 1137 7 6292
macromolecular complex 7.9244E-5 7 1635 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

modification-dependent protein catabolic process 5.0409E-12 7 156 7 6292
ubiquitin-dependent protein catabolic process 5.0409E-12 7 156 7 6292
proteolysis involved in cellular protein catabolic process 5.775E-12 7 159 7 6292
modification-dependent macromolecule catabolic process 7.2024E-12 7 164 7 6292
cellular protein catabolic process 9.7024E-12 7 171 7 6292
proteolysis 1.9053E-11 7 188 7 6292
protein catabolic process 1.9785E-11 7 189 7 6292
cellular macromolecule catabolic process 2.1775E-10 7 265 7 6292
macromolecule catabolic process 4.5405E-10 7 294 7 6292
cellular catabolic process 5.1781E-9 7 415 7 6292
catabolic process 1.819E-8 7 496 7 6292
cellular protein metabolic process 4.1538E-6 7 1074 7 6292
protein metabolic process 6.1593E-6 7 1136 7 6292
cellular macromolecule metabolic process 8.282E-4 7 2285 7 6292
macromolecule metabolic process 1.0051E-3 7 2349 7 6292
primary metabolic process 4.3588E-3 7 2896 7 6292
cellular metabolic process 6.026E-3 7 3033 7 6292
metabolic process 7.9792E-3 7 3157 7 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endopeptidase activity 2.2939E-15 7 54 7 6292
peptidase activity, acting on L-amino acid peptides 1.4313E-13 7 95 7 6292
peptidase activity 2.2131E-11 7 192 7 6292
hydrolase activity 1.3077E-6 7 911 7 6292
catalytic activity 5.4045E-4 7 2150 7 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle