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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

COPII vesicle coat 4.2416E-6 3 8 2 6292
ER to Golgi transport vesicle membrane 4.2416E-6 3 8 2 6292
transport vesicle membrane 1.5894E-5 3 15 2 6292
ER to Golgi transport vesicle 7.0268E-5 3 31 2 6292
vesicle coat 8.4748E-5 3 34 2 6292
coated vesicle membrane 8.9875E-5 3 35 2 6292
cytoplasmic vesicle membrane 8.9875E-5 3 35 2 6292
vesicle membrane 8.9875E-5 3 35 2 6292
membrane coat 1.0615E-4 3 38 2 6292
coated membrane 1.0615E-4 3 38 2 6292
cytoplasmic vesicle part 1.1188E-4 3 39 2 6292
transport vesicle 1.4938E-4 3 45 2 6292
coated vesicle 5.114E-4 3 83 2 6292
membrane-bounded vesicle 8.5005E-4 3 107 2 6292
cytoplasmic vesicle 8.5005E-4 3 107 2 6292
cytoplasmic membrane-bounded vesicle 8.5005E-4 3 107 2 6292
vesicle 8.9832E-4 3 110 2 6292
membrane 6.8885E-3 3 1198 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

vesicle organization 1.5615E-4 3 46 2 6292
vesicle-mediated transport 1.5647E-4 3 340 3 6292
ER to Golgi vesicle-mediated transport 5.114E-4 3 83 2 6292
establishment of localization in cell 8.589E-4 3 599 3 6292
cellular localization 1.0628E-3 3 643 3 6292
Golgi vesicle transport 2.089E-3 3 168 2 6292
membrane budding 2.3825E-3 3 5 1 6292
cellular membrane organization 2.8949E-3 3 198 2 6292
membrane organization 2.8949E-3 3 198 2 6292
transport 3.9684E-3 3 997 3 6292
establishment of localization 4.1014E-3 3 1008 3 6292
localization 4.7701E-3 3 1060 3 6292
vesicle docking during exocytosis 5.7116E-3 3 12 1 6292
membrane docking 6.6614E-3 3 14 1 6292
vesicle docking 6.6614E-3 3 14 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

SNARE binding 1.9063E-3 3 4 1 6292
structural molecule activity 8.374E-3 3 339 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle