| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| COPII vesicle coat | 3.8101E-3 | 3 | 8 | 1 | 6292 |
| ER to Golgi transport vesicle membrane | 3.8101E-3 | 3 | 8 | 1 | 6292 |
| transport vesicle membrane | 7.136E-3 | 3 | 15 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleosome positioning | 1.4299E-3 | 3 | 3 | 1 | 6292 |
| vesicle coating | 1.9063E-3 | 3 | 4 | 1 | 6292 |
| membrane budding | 2.3825E-3 | 3 | 5 | 1 | 6292 |
| negative regulation of biosynthetic process | 2.6396E-3 | 3 | 189 | 2 | 6292 |
| negative regulation of cellular biosynthetic process | 2.6396E-3 | 3 | 189 | 2 | 6292 |
| negative regulation of cellular metabolic process | 3.2225E-3 | 3 | 209 | 2 | 6292 |
| negative regulation of metabolic process | 3.2531E-3 | 3 | 210 | 2 | 6292 |
| negative regulation of cellular process | 4.5939E-3 | 3 | 250 | 2 | 6292 |
| negative regulation of biological process | 4.7035E-3 | 3 | 253 | 2 | 6292 |
| negative regulation of gluconeogenesis | 5.7116E-3 | 3 | 12 | 1 | 6292 |
| negative regulation of cellular carbohydrate metabolic process | 5.7116E-3 | 3 | 12 | 1 | 6292 |
| negative regulation of carbohydrate metabolic process | 5.7116E-3 | 3 | 12 | 1 | 6292 |
| regulation of gluconeogenesis | 7.6106E-3 | 3 | 16 | 1 | 6292 |
| regulation of cellular ketone metabolic process | 8.5592E-3 | 3 | 18 | 1 | 6292 |
| chromatin assembly | 9.0332E-3 | 3 | 19 | 1 | 6292 |
| protein deubiquitination | 9.9809E-3 | 3 | 21 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| general transcriptional repressor activity | 9.5344E-4 | 3 | 2 | 1 | 6292 |
| ubiquitin-specific protease activity | 9.5071E-3 | 3 | 20 | 1 | 6292 |
| transcription coactivator activity | 9.9809E-3 | 3 | 21 | 1 | 6292 |