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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 5.9889E-6 5 211 4 6292
nuclear lumen 1.2511E-4 5 453 4 6292
organelle lumen 5.503E-4 5 660 4 6292
intracellular organelle lumen 5.503E-4 5 660 4 6292
membrane-enclosed lumen 6.9283E-4 5 700 4 6292
non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
intracellular non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
nuclear part 4.0435E-3 5 1103 4 6292
preribosome, large subunit precursor 7.1338E-3 5 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 4.3019E-5 5 346 4 6292
ribonucleoprotein complex biogenesis 5.8585E-5 5 374 4 6292
establishment of ribosome localization 1.6296E-4 5 26 2 6292
ribosome localization 1.6296E-4 5 26 2 6292
ribosomal subunit export from nucleus 1.6296E-4 5 26 2 6292
cellular component biogenesis 6.6989E-4 5 694 4 6292
establishment of organelle localization 7.3776E-4 5 55 2 6292
ribosome assembly 9.9868E-4 5 64 2 6292
ribosomal large subunit biogenesis 1.0301E-3 5 65 2 6292
organelle assembly 1.1603E-3 5 69 2 6292
organelle localization 1.7567E-3 5 85 2 6292
ribonucleoprotein complex assembly 2.0552E-3 5 92 2 6292
actomyosin structure organization 2.3825E-3 5 3 1 6292
cytokinesis, actomyosin contractile ring assembly 2.3825E-3 5 3 1 6292
assembly of actomyosin apparatus involved in cell cycle cytokinesis 2.3825E-3 5 3 1 6292
nuclear export 2.5699E-3 5 103 2 6292
nuclear transport 4.0668E-3 5 130 2 6292
nucleocytoplasmic transport 4.0668E-3 5 130 2 6292
ribosomal large subunit export from nucleus 7.1338E-3 5 9 1 6292
cellular macromolecular complex assembly 7.856E-3 5 182 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase activity 9.0741E-4 5 61 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle