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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

small nucleolar ribonucleoprotein complex 4.9972E-11 8 72 6 6292
ribonucleoprotein complex 7.018E-6 8 514 6 6292
nuclear outer membrane 1.3142E-4 8 86 3 6292
nuclear membrane 1.8808E-4 8 97 3 6292
outer membrane 1.1227E-3 8 178 3 6292
organelle outer membrane 1.1227E-3 8 178 3 6292
nuclear envelope 1.5517E-3 8 199 3 6292
nuclear membrane-endoplasmic reticulum network 2.4152E-3 8 232 3 6292
macromolecular complex 5.1894E-3 8 1635 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

maturation of SSU-rRNA 4.7479E-7 8 59 4 6292
ribosome biogenesis 6.7573E-7 8 346 6 6292
ribonucleoprotein complex biogenesis 1.0727E-6 8 374 6 6292
rRNA processing 1.0741E-5 8 128 4 6292
rRNA metabolic process 1.4075E-5 8 137 4 6292
cellular component biogenesis 4.0619E-5 8 694 6 6292
ncRNA processing 8.3316E-5 8 215 4 6292
ncRNA metabolic process 1.6718E-4 8 257 4 6292
RNA processing 7.546E-4 8 380 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

snoRNA binding 1.1477E-10 8 31 5 6292
RNA binding 3.1798E-5 8 367 5 6292
nucleic acid binding 5.58E-4 8 666 5 6292
binding 1.4278E-3 8 1294 6 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle