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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

clathrin coat of trans-Golgi network vesicle 1.9272E-9 4 6 3 6292
AP-1 adaptor complex 1.9272E-9 4 6 3 6292
trans-Golgi network transport vesicle membrane 3.3722E-9 4 7 3 6292
clathrin adaptor complex 1.1558E-8 4 10 3 6292
trans-Golgi network transport vesicle 1.589E-8 4 11 3 6292
clathrin vesicle coat 3.5042E-8 4 14 3 6292
clathrin coat 3.5042E-8 4 14 3 6292
AP-type membrane coat adaptor complex 3.5042E-8 4 14 3 6292
clathrin coated vesicle membrane 4.3797E-8 4 15 3 6292
transport vesicle membrane 4.3797E-8 4 15 3 6292
Golgi-associated vesicle membrane 5.3897E-8 4 16 3 6292
clathrin-coated vesicle 4.3185E-7 4 31 3 6292
vesicle coat 5.7469E-7 4 34 3 6292
coated vesicle membrane 6.2849E-7 4 35 3 6292
cytoplasmic vesicle membrane 6.2849E-7 4 35 3 6292
vesicle membrane 6.2849E-7 4 35 3 6292
membrane coat 8.0979E-7 4 38 3 6292
coated membrane 8.0979E-7 4 38 3 6292
cytoplasmic vesicle part 8.7717E-7 4 39 3 6292
Golgi-associated vesicle 9.4818E-7 4 40 3 6292
transport vesicle 1.361E-6 4 45 3 6292
Golgi membrane 1.7662E-6 4 49 3 6292
coated vesicle 8.7723E-6 4 83 3 6292
membrane-bounded vesicle 1.8896E-5 4 107 3 6292
cytoplasmic vesicle 1.8896E-5 4 107 3 6292
cytoplasmic membrane-bounded vesicle 1.8896E-5 4 107 3 6292
vesicle 2.0538E-5 4 110 3 6292
Golgi apparatus part 2.603E-5 4 119 3 6292
Golgi apparatus 7.7347E-5 4 171 3 6292
membrane part 1.2155E-4 4 662 4 6292
endomembrane system 9.5789E-4 4 398 3 6292
membrane 1.3089E-3 4 1198 4 6292
organelle membrane 4.8652E-3 4 692 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Golgi to vacuole transport 1.9461E-7 4 24 3 6292
post-Golgi vesicle-mediated transport 4.7935E-6 4 68 3 6292
vacuolar transport 2.3482E-5 4 115 3 6292
Golgi vesicle transport 7.3351E-5 4 168 3 6292
vesicle-mediated transport 6.0073E-4 4 340 3 6292
intracellular transport 2.525E-3 4 553 3 6292
establishment of localization in cell 3.1914E-3 4 599 3 6292
cellular localization 3.9267E-3 4 643 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

clathrin binding 1.589E-8 4 11 3 6292
protein binding 3.3984E-3 4 612 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle