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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AMP-activated protein kinase complex 1.9272E-9 4 6 3 6292
nuclear envelope lumen 1.8182E-6 4 4 2 6292
organelle envelope lumen 2.3456E-4 4 40 2 6292
nuclear envelope 5.7261E-3 4 199 2 6292
vacuole 6.3039E-3 4 209 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein amino acid phosphorylation 6.7767E-8 4 103 4 6292
phosphorylation 6.339E-7 4 179 4 6292
phosphorus metabolic process 1.7107E-6 4 229 4 6292
phosphate metabolic process 1.7107E-6 4 229 4 6292
biological adhesion 8.4777E-6 4 8 2 6292
cell adhesion 8.4777E-6 4 8 2 6292
post-translational protein modification 1.02E-5 4 357 4 6292
regulation of protein complex assembly 1.6642E-5 4 11 2 6292
protein modification process 3.9123E-5 4 499 4 6292
regulation of cellular component biogenesis 4.6226E-5 4 18 2 6292
macromolecule modification 6.624E-5 4 569 4 6292
signal transduction 1.5134E-4 4 214 3 6292
signal transmission 1.5777E-4 4 217 3 6292
signaling process 1.5777E-4 4 217 3 6292
signaling 2.465E-4 4 252 3 6292
invasive growth in response to glucose limitation 3.246E-4 4 47 2 6292
regulation of cellular component organization 8.2831E-4 4 75 2 6292
cellular protein metabolic process 8.4498E-4 4 1074 4 6292
protein metabolic process 1.058E-3 4 1136 4 6292
filamentous growth of a population of unicellular organisms 1.1916E-3 4 90 2 6292
growth of unicellular organism as a thread of attached cells 1.1916E-3 4 90 2 6292
cellular response to nitrogen levels 1.2712E-3 4 2 1 6292
cellular response to nitrogen starvation 1.2712E-3 4 2 1 6292
filamentous growth 1.6501E-3 4 106 2 6292
glucose metabolic process 1.7442E-3 4 109 2 6292
hexose metabolic process 2.2525E-3 4 124 2 6292
positive regulation of gluconeogenesis 2.5411E-3 4 4 1 6292
monosaccharide metabolic process 2.6654E-3 4 135 2 6292
growth 3.0699E-3 4 145 2 6292
protein complex biogenesis 3.5019E-3 4 155 2 6292
protein complex assembly 3.5019E-3 4 155 2 6292
biofilm formation 3.8098E-3 4 6 1 6292
positive regulation of glucose metabolic process 5.0773E-3 4 8 1 6292
positive regulation of cellular carbohydrate metabolic process 5.0773E-3 4 8 1 6292
positive regulation of carbohydrate metabolic process 5.0773E-3 4 8 1 6292
alcohol metabolic process 6.97E-3 4 220 2 6292
regulation of cellular process 7.309E-3 4 796 3 6292
regulation of biological process 8.0789E-3 4 824 3 6292
cellular carbohydrate metabolic process 9.8029E-3 4 262 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AMP-activated protein kinase activity 1.9272E-9 4 6 3 6292
protein kinase activity 3.6385E-7 4 156 4 6292
phosphotransferase activity, alcohol group as acceptor 9.521E-7 4 198 4 6292
kinase activity 1.5096E-6 4 222 4 6292
protein serine/threonine kinase activity 1.1588E-5 4 91 3 6292
transferase activity, transferring phosphorus-containing groups 1.959E-5 4 420 4 6292
transferase activity 2.5575E-4 4 797 4 6292

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Created and Maintained by: Michael Riffle