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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Golgi trans cisterna 1.5888E-3 2 5 1 6292
early endosome 1.5888E-3 2 5 1 6292
endoplasmic reticulum 3.3381E-3 2 364 2 6292
Golgi stack 5.0798E-3 2 16 1 6292
Golgi cisterna 5.0798E-3 2 16 1 6292
organelle subcompartment 5.0798E-3 2 16 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sterol transport 6.8716E-6 2 17 2 6292
lipid transport 3.3651E-5 2 37 2 6292
lipid localization 3.744E-5 2 39 2 6292
exocytosis 5.2295E-5 2 46 2 6292
secretion 7.2304E-5 2 54 2 6292
secretion by cell 7.2304E-5 2 54 2 6292
endocytosis 1.9342E-4 2 88 2 6292
membrane invagination 2.2085E-4 2 94 2 6292
membrane organization 9.8542E-4 2 198 2 6292
cellular membrane organization 9.8542E-4 2 198 2 6292
vesicle-mediated transport 2.9119E-3 2 340 2 6292
macromolecule localization 3.9717E-3 2 397 2 6292
establishment of localization in cell 9.0494E-3 2 599 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sterol binding 1.819E-6 2 9 2 6292
oxysterol binding 1.819E-6 2 9 2 6292
steroid binding 1.819E-6 2 9 2 6292
phosphatidylinositol binding 2.2737E-6 2 10 2 6292
phosphoinositide binding 3.3651E-5 2 37 2 6292
phospholipid binding 4.5626E-5 2 43 2 6292
lipid binding 6.1895E-5 2 50 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle