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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endosome 1.2994E-3 4 94 2 6292
Golgi apparatus 4.2502E-3 4 171 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

vesicle-mediated transport 8.3846E-6 4 340 4 6292
transport 6.2722E-4 4 997 4 6292
establishment of localization 6.5541E-4 4 1008 4 6292
localization 8.0172E-4 4 1060 4 6292
establishment of localization in cell 3.1914E-3 4 599 3 6292
cellular localization 3.9267E-3 4 643 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase activity 3.4452E-6 4 61 3 6292
nucleoside-triphosphatase activity 5.4488E-4 4 329 3 6292
Rab GDP-dissociation inhibitor activity 6.3573E-4 4 1 1 6292
hydrolase activity, acting on acid anhydrides 6.7144E-4 4 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.7144E-4 4 353 3 6292
pyrophosphatase activity 6.7144E-4 4 353 3 6292
GDP-dissociation inhibitor activity 1.2712E-3 4 2 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle