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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

lysine biosynthetic process via aminoadipic acid 4.2416E-6 3 8 2 6292
lysine biosynthetic process 5.4528E-6 3 9 2 6292
lysine metabolic process 5.4528E-6 3 9 2 6292
aspartate family amino acid biosynthetic process 3.8264E-5 3 23 2 6292
aspartate family amino acid metabolic process 1.4938E-4 3 45 2 6292
cellular amino acid biosynthetic process 9.6474E-4 3 114 2 6292
amine biosynthetic process 1.1046E-3 3 122 2 6292
organic acid biosynthetic process 1.4327E-3 3 139 2 6292
carboxylic acid biosynthetic process 1.4327E-3 3 139 2 6292
cellular amino acid metabolic process 2.9239E-3 3 199 2 6292
cellular amine metabolic process 3.6317E-3 3 222 2 6292
amine metabolic process 4.3431E-3 3 243 2 6292
cellular amino acid and derivative metabolic process 4.3431E-3 3 243 2 6292
cellular nitrogen compound biosynthetic process 4.4856E-3 3 247 2 6292
small molecule biosynthetic process 7.0229E-3 3 310 2 6292
organic acid metabolic process 8.0851E-3 3 333 2 6292
oxoacid metabolic process 8.0851E-3 3 333 2 6292
carboxylic acid metabolic process 8.0851E-3 3 333 2 6292
cellular ketone metabolic process 8.7172E-3 3 346 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

homocitrate synthase activity 1.5158E-7 3 2 2 6292
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 6.8153E-6 3 10 2 6292
transferase activity, transferring acyl groups 8.5005E-4 3 107 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle