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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 3.9227E-5 5 101 3 6292
cytosolic part 6.9145E-5 5 122 3 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
ribosomal subunit 2.3185E-4 5 183 3 6292
preribosome 2.8058E-4 5 34 2 6292
cytosol 8.504E-4 5 284 3 6292
cytosolic large ribosomal subunit 8.7794E-4 5 60 2 6292
ribosome 9.043E-4 5 290 3 6292
large ribosomal subunit 2.9264E-3 5 110 2 6292
preribosome, small subunit precursor 4.7604E-3 5 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 5.9837E-5 5 376 4 6292
regulation of translation 7.924E-4 5 57 2 6292
posttranscriptional regulation of gene expression 9.0741E-4 5 61 2 6292
cellular biosynthetic process 9.5349E-4 5 1567 5 6292
biosynthetic process 1.065E-3 5 1602 5 6292
regulation of cellular protein metabolic process 1.127E-3 5 68 2 6292
regulation of protein metabolic process 1.3337E-3 5 74 2 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
protein metabolic process 4.528E-3 5 1136 4 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
lysine biosynthetic process via aminoadipic acid 6.3431E-3 5 8 1 6292
lysine biosynthetic process 7.1338E-3 5 9 1 6292
lysine metabolic process 7.1338E-3 5 9 1 6292
gene expression 7.2106E-3 5 1283 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 6.1033E-6 5 212 4 6292
structural molecule activity 3.9664E-5 5 339 4 6292
homocitrate synthase activity 1.5888E-3 5 2 1 6292
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 7.9239E-3 5 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle