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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RSC complex 1.8896E-13 5 20 5 6292
chromatin remodeling complex 8.7172E-10 5 99 5 6292
nuclear part 1.6432E-4 5 1103 5 6292
protein complex 1.913E-4 5 1137 5 6292
macromolecular complex 1.1794E-3 5 1635 5 6292
nucleus 3.5796E-3 5 2041 5 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin remodeling 1.2705E-10 5 68 5 6292
chromatin modification 1.28E-8 5 168 5 6292
chromatin organization 3.3318E-8 5 203 5 6292
ATP-dependent chromatin remodeling 6.2313E-7 5 26 3 6292
chromosome organization 5.2525E-6 5 555 5 6292
organelle organization 1.8302E-4 5 1127 5 6292
cellular component organization 1.0001E-3 5 1582 5 6292
chromatin remodeling at centromere 1.5888E-3 5 2 1 6292
chromosome segregation 3.9447E-3 5 128 2 6292
DNA metabolic process 6.9303E-3 5 585 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA-dependent ATPase activity 6.2441E-6 5 55 3 6292
ATPase activity, coupled 1.2571E-4 5 149 3 6292
ATPase activity 3.5374E-4 5 211 3 6292
nucleoside-triphosphatase activity 1.3094E-3 5 329 3 6292
hydrolase activity, acting on acid anhydrides 1.6087E-3 5 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.6087E-3 5 353 3 6292
pyrophosphatase activity 1.6087E-3 5 353 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle