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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 9.029E-9 7 211 6 6292
nuclear lumen 8.8765E-7 7 453 6 6292
non-membrane-bounded organelle 1.8755E-6 7 959 7 6292
intracellular non-membrane-bounded organelle 1.8755E-6 7 959 7 6292
organelle lumen 8.3215E-6 7 660 6 6292
intracellular organelle lumen 8.3215E-6 7 660 6 6292
membrane-enclosed lumen 1.1789E-5 7 700 6 6292
nuclear part 1.7083E-4 7 1103 6 6292
intracellular organelle part 8.2061E-4 7 2282 7 6292
organelle part 8.2061E-4 7 2282 7 6292
box C/D snoRNP complex 2.224E-3 7 2 1 6292
nuclear outer membrane 3.7089E-3 7 86 2 6292
nuclear membrane 4.6971E-3 7 97 2 6292
nucleus 5.8629E-3 7 2041 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 1.7714E-7 7 346 6 6292
ribonucleoprotein complex biogenesis 2.8234E-7 7 374 6 6292
rRNA processing 5.4565E-6 7 128 4 6292
rRNA metabolic process 7.1582E-6 7 137 4 6292
cellular component biogenesis 1.1204E-5 7 694 6 6292
ncRNA processing 4.2803E-5 7 215 4 6292
ncRNA metabolic process 8.6358E-5 7 257 4 6292
RNA processing 3.9614E-4 7 380 4 6292
maturation of SSU-rRNA 1.7614E-3 7 59 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle