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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosol 4.0674E-6 4 284 4 6292
fungal-type vacuole 3.6369E-3 4 158 2 6292
lytic vacuole 3.6369E-3 4 158 2 6292
storage vacuole 3.6369E-3 4 158 2 6292
vacuole 6.3039E-3 4 209 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sulfate assimilation 1.3619E-5 4 10 2 6292
vacuole inheritance 3.1744E-5 4 15 2 6292
retrograde vesicle-mediated transport, Golgi to ER 9.8027E-5 4 26 2 6292
vacuole fusion, non-autophagic 1.0585E-4 4 27 2 6292
organelle inheritance 2.8424E-4 4 44 2 6292
vacuole organization 3.1085E-4 4 46 2 6292
membrane fusion 6.6109E-4 4 67 2 6292
cellular membrane fusion 6.6109E-4 4 67 2 6292
response to oxidative stress 7.0115E-4 4 69 2 6292
DNA-dependent DNA replication 9.898E-4 4 82 2 6292
ER to Golgi vesicle-mediated transport 1.014E-3 4 83 2 6292
sulfur metabolic process 1.1916E-3 4 90 2 6292
monohydric alcohol biosynthetic process 1.2712E-3 4 2 1 6292
ethanol biosynthetic process involved in glucose fermentation to ethanol 1.2712E-3 4 2 1 6292
ethanol biosynthetic process 1.2712E-3 4 2 1 6292
DNA replication 2.2167E-3 4 123 2 6292
Golgi vesicle transport 4.1046E-3 4 168 2 6292
glucose catabolic process to ethanol 4.4437E-3 4 7 1 6292
glycolytic fermentation 5.0773E-3 4 8 1 6292
cellular membrane organization 5.6697E-3 4 198 2 6292
membrane organization 5.6697E-3 4 198 2 6292
monohydric alcohol metabolic process 6.9763E-3 4 11 1 6292
ethanol metabolic process 6.9763E-3 4 11 1 6292
NADH oxidation 7.6087E-3 4 12 1 6292
NADH metabolic process 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

thiol-disulfide exchange intermediate activity 8.4777E-6 4 8 2 6292
obsolete_molecular_function 7.0115E-4 4 69 2 6292
inorganic diphosphatase activity 1.2712E-3 4 2 1 6292
alcohol dehydrogenase (NAD) activity 4.4437E-3 4 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle