| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.07] [SVM Score: 0.478829174093] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ERG1 |
|
|
|
| ERG25 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endoplasmic reticulum | 3.3381E-3 | 2 | 364 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| phytosteroid metabolic process | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| phytosteroid biosynthetic process | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| ergosterol biosynthetic process | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| ergosterol metabolic process | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| steroid biosynthetic process | 2.5061E-5 | 2 | 32 | 2 | 6292 |
| sterol biosynthetic process | 2.5061E-5 | 2 | 32 | 2 | 6292 |
| sterol metabolic process | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| steroid metabolic process | 4.5626E-5 | 2 | 43 | 2 | 6292 |
| lipid biosynthetic process | 4.2367E-4 | 2 | 130 | 2 | 6292 |
| alcohol metabolic process | 1.2172E-3 | 2 | 220 | 2 | 6292 |
| lipid metabolic process | 1.4491E-3 | 2 | 240 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| monooxygenase activity | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.2783E-5 | 2 | 23 | 2 | 6292 |
| C-4 methylsterol oxidase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| squalene monooxygenase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| drug binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |