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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.585655866651]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
OXA1
  • mitochondrion
  • mitochondrial inner membrane
    		•
  • protein insertion into mitochondrial membrane from inner side
    		•
  • membrane insertase activity
    		•
    TIM22
  • mitochondrion
  • mitochondrial inner membrane protein insertion complex
    		•
  • protein import into mitochondrial inner membrane
    		•
  • protein transporter activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    mitochondrial inner membrane 7.6048E-4 2 174 2 6292
    organelle inner membrane 8.5997E-4 2 185 2 6292
    mitochondrial inner membrane protein insertion complex 1.2712E-3 2 4 1 6292
    mitochondrial membrane 1.7808E-3 2 266 2 6292
    mitochondrial envelope 2.4514E-3 2 312 2 6292
    mitochondrial part 5.6881E-3 2 475 2 6292
    envelope 6.43E-3 2 505 2 6292
    organelle envelope 6.43E-3 2 505 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    mitochondrial membrane organization 1.1672E-5 2 22 2 6292
    protein insertion into mitochondrial membrane from inner side 3.1786E-4 2 1 1 6292
    protein insertion into membrane from inner side 3.1786E-4 2 1 1 6292
    mitochondrion organization 6.1087E-4 2 156 2 6292
    localization within membrane 9.5344E-4 2 3 1 6292
    protein insertion into mitochondrial membrane 9.5344E-4 2 3 1 6292
    protein insertion into membrane 9.5344E-4 2 3 1 6292
    membrane organization 9.8542E-4 2 198 2 6292
    cellular membrane organization 9.8542E-4 2 198 2 6292
    cellular protein localization 1.8898E-3 2 274 2 6292
    cellular macromolecule localization 2.0305E-3 2 284 2 6292
    protein localization 2.3118E-3 2 303 2 6292
    protein import into mitochondrial inner membrane 2.5415E-3 2 8 1 6292
    inner mitochondrial membrane organization 3.811E-3 2 12 1 6292
    macromolecule localization 3.9717E-3 2 397 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    protein transporter activity 8.3521E-5 2 58 2 6292
    membrane insertase activity 3.1786E-4 2 1 1 6292
    substrate-specific transporter activity 2.8436E-3 2 336 2 6292
    transporter activity 4.1132E-3 2 404 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle