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View Structure Prediction Details

Protein: par-1-PB
Organism: Drosophila melanogaster
Length: 905 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for par-1-PB.

Description E-value Query
Range
Subject
Range
par-1-PA - The gene par-1 is referred to in FlyBase by the symbol Dmel\par-1 (CG8201, FBgn0260934). It is a pro...
627.0 [0..1] [905..1]

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Predicted Domain #1
Region A:
Residues: [1-517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAMRTTLQ SVPEALPADS VSNGTASNVA APAAPVSSAT NAVPPLAAVS STTATYATNS  60
   61 ISTSSHSVKD QQQQQQQQQH DSANANIVSL PPTTTPVANT NTMMPIVTSS NSATSNSTAA 120
  121 TPTPASGAAA TGGVGSVSQG PATVSASAAN TNHSHQHSHQ HHHHVANNMT TDGARLSSNN 180
  181 SAVVASSAIN HHHHHTPGSG VAPTVNKNVL STHSAHPSAI KQRTSSAKGS PNMQMRSSAP 240
  241 MRWRATEEHI GKYKLIKTIG KGNFAKVKLA KHLPTGKEVA IKIIDKTQLN PGSLQKLFRE 300
  301 VRIMKMLDHP NIVKLFQVIE TEKTLYLIME YASGGEVFDY LVLHGRMKEK EARVKFRQIV 360
  361 SAVQYCHQKR IIHRDLKAEN LLLDSELNIK IADFGFSNEF TPGSKLDTFC GSPPYAAPEL 420
  421 FQGKKYDGPE VDVWSLGVIL YTLVSGSLPF DGSTLRELRE RVLRGKYRIP FYMSTDCENL 480
  481 LRKFLVLNPA KRASLETIMG DKWMNMGFEE DELKPYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
protein kinase activity 5.4586557943719 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 5.04467222534257 bayes_pls_golite062009
kinase activity 4.85903980916957 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.63692708178478 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.26787750561728 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
tubulin binding 2.18641675163967 bayes_pls_golite062009
cytoskeletal protein binding 2.12615078788254 bayes_pls_golite062009
telethonin binding 2.01406978272617 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
microtubule binding 1.88110801192607 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
JUN kinase kinase kinase activity 1.41172362253967 bayes_pls_golite062009
protein tyrosine kinase activity 1.3898059094397 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.38496328649031 bayes_pls_golite062009
molecular adaptor activity 1.33740973673697 bayes_pls_golite062009
actin binding 1.33479685165255 bayes_pls_golite062009
receptor signaling protein activity 1.27291233344322 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.2323381312171 bayes_pls_golite062009
protein binding 1.22565748038754 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
alpha-actinin binding 1.13281682085386 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.959360414036299 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
structural constituent of cytoskeleton 0.612883428421652 bayes_pls_golite062009
nucleic acid binding 0.444972929276369 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
molecular transducer activity 0.270054246024761 bayes_pls_golite062009
signal transducer activity 0.270054246024761 bayes_pls_golite062009
actin filament binding 0.2403700250846 bayes_pls_golite062009
transcription regulator activity 0.222474717779546 bayes_pls_golite062009
DNA binding 0.198054762876122 bayes_pls_golite062009
transporter activity 0.187543377461637 bayes_pls_golite062009
MAP kinase activity 0.08504542461349 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.0556163711947139 bayes_pls_golite062009
transmembrane transporter activity 0.0413380592707298 bayes_pls_golite062009
transcription factor activity 0.026050048647416 bayes_pls_golite062009
transmembrane receptor activity 0.00652065412910241 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [518-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPKADLADPK RIEALVAMGY NRSEIEASLS QVRYDDVFAT YLLLGRKSTD PESDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.221849
Match: 2qnjA
Description: No description for 2qnjA was found.

Predicted Domain #3
Region A:
Residues: [573-737]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRSGSSLSLR NISGNDAGAN AGSASVQSPT HRGVHRSISA SSTKPSRRAS SGVGPTNAAA  60
   61 TVAAATGAVG AVNPSNNYNA AGSAADRASV GSNFKRQNTI DSATIKENTA RLAAQNQRPA 120
  121 SATQKMLTTA DTTLNSPAKP RTATKYDPTN GNRTVSGTSG IIPRR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #4
Region A:
Residues: [738-795]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STTLYEKTSS TEKTNVIPAE TKARNNTALE YSGTSGASGD SSHPGRMSFF SKLSSRFS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [796-905]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRPTIADEAA KPRVLRFTWS MKTTSPLMPD QIMQKIREVL DQNNCDYEQR ERFVLWCVHG  60
   61 DPNTDSLVQW EIEVCKLPRL SLNGVRFKRI SGTSIGFKNI ASRIAFDLKL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 1ul7A
Description: Solution structure of kinase associated domain 1 of mouse MAP/microtubule affinity-regulating kinase 3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein kinase activity 4.05475891009228 bayes_pls_golite062009
protein serine/threonine kinase activity 3.7974128326421 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 3.59230737331367 bayes_pls_golite062009
kinase activity 3.41737435609334 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 3.2342722637405 bayes_pls_golite062009
binding 2.41732321506551 bayes_pls_golite062009
transferase activity 2.04713540681686 bayes_pls_golite062009
ATP binding 1.44435058039859 bayes_pls_golite062009
adenyl ribonucleotide binding 1.41005152726625 bayes_pls_golite062009
adenyl nucleotide binding 1.38971642420542 bayes_pls_golite062009
ribonucleotide binding 1.16863558166547 bayes_pls_golite062009
purine ribonucleotide binding 1.16859376715941 bayes_pls_golite062009
purine nucleotide binding 1.15633908642115 bayes_pls_golite062009
nucleotide binding 1.14964488472581 bayes_pls_golite062009
AMP-activated protein kinase activity 1.12923456567012 bayes_pls_golite062009
catalytic activity 0.836142537655721 bayes_pls_golite062009
protein binding 0.704339182896017 bayes_pls_golite062009
magnesium ion binding 0.439688030503848 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle