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View Structure Prediction Details

Protein: ENTF_ECOLI
Organism: Escherichia coli
Length: 1293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENTF_ECOLI.

Description E-value Query
Range
Subject
Range
gi|75701558, gi|... - gi|75907833|ref|YP_322129.1| amino acid adenylation [Anabaena variabilis ATCC 29413], gi|75701558|gb...
1089.0 [0..5] [1292..85]
gi|27817223 - gi|27817223|gb|AAO23334.1| NcpB [Nostoc sp. ATCC 53789]
1080.0 [0..5] [1291..1112]
gi|186682529, gi... - gi|23129063|ref|ZP_00110897.1| COG1020: Non-ribosomal peptide synthetase modules and related protein...
1080.0 [0..5] [1291..1111]
gi|6563397 - gi|6563397|gb|AAF15891.2|AF204805_1 NosA [Nostoc sp. GSV224]
1076.0 [0..5] [1291..1097]
gi|89203970, gi|... - gi|89203970|ref|ZP_01182549.1| Non-ribosomal peptide synthase:Amino acid adenylation [Bacillus weihe...
1047.0 [0..3] [1291..31]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHLPLVAA QPGIWMAEKL SELPSAWSVA HYVELTGEVD SPLLARAVVA GLAQADTLRM  60
   61 RFTEDNGEVW QWVDDALTFE LPEIIDLRTN IDPHGTAQAL MQADLQQDLR VDSGKPLVFH 120
  121 QLIQVADNRW YWYQRYHHLL VDGFSFPAIT RQIANIYCTW LRGEPTPASP FTPFADVVEE 180
  181 YQQYRESEAW QRDAAFWAEQ RRQLPPPASL SPAPLPGRSA SADILRLKLE FTDGEFRQLA 240
  241 TQLSGVQRTD LALALAALWL GRLCNRMDYA AGFIFMRRLG SAALTATGPV LNVLPLGIHI 300
  301 AAQETLPELA TRLAAQLKKM RRHQRYDAEQ IVRDSGRAAG DEPLFGPVLN IKVFDYQLDI 360
  361 PDVQAQTHTL ATGPVNDLEL ALFPDVHGDL SIEILANKQR YDEPTLIQHA ERLKMLIAQF 420
  421 AADPALLCGD VDIMLP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 1l5aA
Description: VibH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carnitine O-acyltransferase activity 4.72256585500196 bayes_pls_golite062009
S-acyltransferase activity 4.44987112475286 bayes_pls_golite062009
dihydrolipoamide S-acyltransferase activity 3.56004160262054 bayes_pls_golite062009
dihydrolipoyllysine-residue acetyltransferase activity 3.36143851730669 bayes_pls_golite062009
S-acetyltransferase activity 3.32990830846882 bayes_pls_golite062009
carnitine O-acetyltransferase activity 3.14424917442399 bayes_pls_golite062009
acyltransferase activity 3.08588280042054 bayes_pls_golite062009
O-acyltransferase activity 3.04191754934811 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 3.027770031317 bayes_pls_golite062009
S-succinyltransferase activity 3.02354522717247 bayes_pls_golite062009
dihydrolipoyllysine-residue succinyltransferase activity 3.02354522717247 bayes_pls_golite062009
transferase activity, transferring acyl groups 2.50610942105142 bayes_pls_golite062009
O-acetyltransferase activity 1.96686967086593 bayes_pls_golite062009
transferase activity 1.78692523095641 bayes_pls_golite062009
catalytic activity 1.51562638409295 bayes_pls_golite062009
O-palmitoyltransferase activity 1.47719255709603 bayes_pls_golite062009
carnitine O-palmitoyltransferase activity 1.47719255709603 bayes_pls_golite062009
pyruvate dehydrogenase activity 0.85838145786229 bayes_pls_golite062009
octanoyltransferase activity 0.673263368388056 bayes_pls_golite062009
O-octanoyltransferase activity 0.673263368388056 bayes_pls_golite062009
carnitine O-octanoyltransferase activity 0.673263368388056 bayes_pls_golite062009
binding 0.406715755927461 bayes_pls_golite062009
succinyltransferase activity 0.271602729407812 bayes_pls_golite062009
palmitoyltransferase activity 0.200750596708501 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [437-970]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEYAQLAQLN ATQVEIPETT LSALVAEQAA KTPDAPALAD ARYLFSYREM REQVVALANL  60
   61 LRERGVKPGD SVAVALPRSV FLTLALHAIV EAGAAWLPLD TGYPDDRLKM MLEDARPSLL 120
  121 ITTDDQLPRF SDVPNLTSLC YNAPLTPQGS APLQLSQPHH TAYIIFTSGS TGRPKGVMVG 180
  181 QTAIVNRLLW MQNHYPLTGE DVVAQKTPCS FDVSVWEFFW PFIAGAKLVM AEPEAHRDPL 240
  241 AMQQFFAEYG VTTTHFVPSM LAAFVASLTP QTARQSCATL KQVFCSGEAL PADLCREWQQ 300
  301 LTGAPLHNLY GPTEAAVDVS WYPAFGEELA QVRGSSVPIG YPVWNTGLRI LDAMMHPVPP 360
  361 GVAGDLYLTG IQLAQGYLGR PDLTASRFIA DPFAPGERMY RTGDVARWLD NGAVEYLGRS 420
  421 DDQLKIRGQR IELGEIDRVM QALPDVEQAV THACVINQAA ATGGDARQLV GYLVSQSGLP 480
  481 LDTSALQAQL RETLPPHMVP VVLLQLPQLP LSANGKLDRK ALPLPELKAQ APGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 119.0
Match: 1amuA
Description: Phenylalanine activating domain of gramicidin synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
fatty acid ligase activity 4.83067429373059 bayes_pls_golite062009
long-chain fatty acid-CoA ligase activity 4.72692389032116 bayes_pls_golite062009
ligase activity, forming carbon-sulfur bonds 4.4819902512335 bayes_pls_golite062009
acetate-CoA ligase activity 3.08569212862289 bayes_pls_golite062009
acid-thiol ligase activity 2.89129353633634 bayes_pls_golite062009
CoA-ligase activity 2.5960476232329 bayes_pls_golite062009
ligase activity 2.49556073715112 bayes_pls_golite062009
catalytic activity 1.83545185797733 bayes_pls_golite062009
binding 0.509078620937952 bayes_pls_golite062009
transcription regulator activity 0.245590924269919 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [971-1044]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APKAGSETII AAAFSSLLGC DVQDADADFF ALGGHSLLAM KLAAQLSRQV ARQVTPGQVM  60
   61 VASTVAKLAT IIDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 2gdwA
Description: No description for 2gdwA was found.

Predicted functions:

Term Confidence Notes
acyl carrier activity 3.10595395492178 bayes_pls_golite062009
binding 0.75121024810315 bayes_pls_golite062009
transporter activity 0.13827434266385 bayes_pls_golite062009
catalytic activity 0.037428828577411 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [1045-1293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEDSTRRMGF ETILPLREGN GPTLFCFHPA SGFAWQFSVL SRYLDPQWSI IGIQSPRPNG  60
   61 PMQTAANLDE VCEAHLATLL EQQPHGPYYL LGYSLGGTLA QGIAARLRAR GEQVAFLGLL 120
  121 DTWPPETQNW QEKEANGLDP EVLAEINRER EAFLAAQQGS TSTELFTTIE GNYADAVRLL 180
  181 TTAHSVPFDG KATLFVAERT LQEGMSPERA WSPWIAELDI YRQDCAHVDI ISPGTFEKIG 240
  241 PIIRATLNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1jmkC
Description: Surfactin synthetase, SrfA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.89798820741335 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 1.54887505564745 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.736960094719075 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009
acyl-CoA thioesterase activity 0.22764257388982 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle