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View Structure Prediction Details

Protein: AB29B_ARATH
Organism: Arabidopsis thaliana
Length: 634 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB29B_ARATH.

Description E-value Query
Range		 Subject
Range
Y288_THEMA - Uncharacterized ABC transporter ATP-binding protein TM_0288 OS=Thermotoga maritima GN=TM_0288 PE=3 S...
Y288_THEMA - Uncharacterized ABC transporter ATP-binding protein TM_0288 OS=Thermotoga maritima (strain ATCC 4358...
 499.0 [0..44] [634..7]

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Predicted Domain #1
Region A:
Residues: [1-634] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLLLTPPP CLLIPPPPLS HRRSSSLFLK HPFQPSPRPL SFCKPSALRL RANTTVNSLK  60
   61 ALETIKPYLQ SESKTVLLGW LCSCVSVVSL SQIVPRLGSF TSNLNANAAS LTKLKGECLV 120
  121 LAGLVLAKVV AYYLQQAFLW EAALNTVYKI RVFAYRRVLE RELEFFEGGN GISSGDIAYR 180
  181 ITAEASEVAD TIYALLNTVV PSAIQISVMT AHMIVASPAL TLVSAMVIPS VALLIAYLGD 240
  241 RLRKISRKAQ IASAQLSTYL NEVLPAILFV KANNAEISES VRFQRFARAD LDERFKKKKM 300
  301 KSLIPQIVQV MYLGSLSIFC VGAVILAGSS LSSSAIVSFV ASLAFLIDPV QDLGKAYNEL 360
  361 KQGEPAIERL FDLTSLESKV IERPEAIQLE KVAGEVELCD ISFKYDENML PVLDGLNLHI 420
  421 KAGETVALVG PSGGGKTTLI KLLLRLYEPS SGSIIIDKID IKDIKLESLR KHVGLVSQDT 480
  481 TLFSGTIADN IGYRDLTTGI DMKRVELAAK TANADEFIRN LPEGYNTGVG PRGSSLSGGQ 540
  541 KQRLAIARAL YQKSSILILD EATSALDSLS ELLVREALER VMQDHTVIVI AHRLETVMMA 600
  601 QRVFLVERGK LKELNRSSLL STHKDSLTSA GLVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 133.0
Match: 2hydA
Description: No description for 2hydA was found.

Predicted functions:

Term Confidence Notes
anion transmembrane-transporting ATPase activity 4.71935767060308 bayes_pls_golite062009
lipid transporter activity 3.78212509785335 bayes_pls_golite062009
transporter activity 3.71239480053329 bayes_pls_golite062009
ion transmembrane transporter activity 3.35436118751376 bayes_pls_golite062009
phosphate transmembrane-transporting ATPase activity 3.20894563245332 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 3.16975154423199 bayes_pls_golite062009
transmembrane transporter activity 3.13960906549884 bayes_pls_golite062009
anion transmembrane transporter activity 3.13913638619234 bayes_pls_golite062009
substrate-specific transporter activity 3.1318898376276 bayes_pls_golite062009
cation transmembrane transporter activity 3.08390071341252 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.00745742755195 bayes_pls_golite062009
drug transmembrane transporter activity 2.97119034312001 bayes_pls_golite062009
amine-transporting ATPase activity 2.69529191205818 bayes_pls_golite062009
organic acid transmembrane transporter activity 2.67957846350199 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 2.67815672695824 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 2.40292717311506 bayes_pls_golite062009
amine transmembrane transporter activity 2.29486577878686 bayes_pls_golite062009
metal ion transmembrane transporter activity 2.26365379756656 bayes_pls_golite062009
2.20174656498665 bayes_pls_golite062009
vitamin transporter activity 2.1653565229854 bayes_pls_golite062009
phosphate transmembrane transporter activity 2.15147988861177 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 2.1115517127743 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 1.82177108193332 bayes_pls_golite062009
organic anion transmembrane transporter activity 1.76999970080179 bayes_pls_golite062009
primary active transmembrane transporter activity 1.59960772126745 bayes_pls_golite062009
amino acid transmembrane transporter activity 1.59627719545436 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 1.59500649635273 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.58971273330352 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 1.57298736672685 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 1.56976791729183 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 1.569458326493 bayes_pls_golite062009
active transmembrane transporter activity 1.52344727747862 bayes_pls_golite062009
hydrolase activity 1.48837078282942 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 1.4343912580786 bayes_pls_golite062009
binding 1.39093533263371 bayes_pls_golite062009
molybdate ion transmembrane transporter activity 1.28313088935613 bayes_pls_golite062009
molybdate transmembrane-transporting ATPase activity 1.28313088935613 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 1.23799860254751 bayes_pls_golite062009
ATPase activity, coupled 1.01987344666956 bayes_pls_golite062009
cation channel activity 0.997064416395892 bayes_pls_golite062009
thiamin transmembrane transporter activity 0.933872128802939 bayes_pls_golite062009
peptide-transporting ATPase activity 0.911425383309011 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.866395248939447 bayes_pls_golite062009
ATPase activity 0.839521337853266 bayes_pls_golite062009
pyrophosphatase activity 0.809080795666113 bayes_pls_golite062009
copper ion transmembrane transporter activity 0.798934081014025 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.794843473528662 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.791858410488564 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 0.767424210804186 bayes_pls_golite062009
peptide transporter activity 0.73541731084591 bayes_pls_golite062009
voltage-gated cation channel activity 0.688632087597536 bayes_pls_golite062009
voltage-gated channel activity 0.562664200036023 bayes_pls_golite062009
voltage-gated ion channel activity 0.559798751382976 bayes_pls_golite062009
branched-chain aliphatic amino acid transmembrane transporter activity 0.442220326523999 bayes_pls_golite062009
potassium channel activity 0.329290830676079 bayes_pls_golite062009
gated channel activity 0.299411774392227 bayes_pls_golite062009
ATP binding 0.25041031085486 bayes_pls_golite062009
adenyl ribonucleotide binding 0.222246201013772 bayes_pls_golite062009
purine nucleotide binding 0.221337173375832 bayes_pls_golite062009
adenyl nucleotide binding 0.218174845341809 bayes_pls_golite062009
ribonucleotide binding 0.216758113536309 bayes_pls_golite062009
purine ribonucleotide binding 0.216707116090091 bayes_pls_golite062009
nucleotide binding 0.213707176772037 bayes_pls_golite062009
GTPase activity 0.20164416416912 bayes_pls_golite062009
ion channel activity 0.154779598791225 bayes_pls_golite062009
amino acid-transporting ATPase activity 0.147644650870465 bayes_pls_golite062009
channel activity 0.134817721656507 bayes_pls_golite062009
passive transmembrane transporter activity 0.134817721656507 bayes_pls_golite062009
substrate-specific channel activity 0.126911677161968 bayes_pls_golite062009
protein transporter activity 0.104820191623932 bayes_pls_golite062009
sulfate transmembrane transporter activity 0.104477131120205 bayes_pls_golite062009
cation-transporting ATPase activity 0.0536898657672154 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle