| Protein: | cul1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 767 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cul1.
| Description | E-value | Query Range |
Subject Range |
|
|
788.0 | [0..12] | [767..6] |
|
|
783.0 | [0..4] | [767..1] |
|
|
781.0 | [0..4] | [767..1] |
|
|
780.0 | [0..4] | [767..1] |
|
|
779.0 | [0..4] | [767..1] |
|
|
779.0 | [0..4] | [767..1] |
|
|
778.0 | [0..4] | [767..1] |
|
Region A: Residues: [1-767] |
1 11 21 31 41 51
| | | | | |
1 MTTLNTNDKD LPIVKKYDSL NGTWDFLKTG VSQIFERLDE GMTITKYMEL YTAIHNYCAD 60
61 ASKTITVDNF NDQTANVLGE ALYNNLVLYL EEYLARLRKE CISQTNHEEQ LAAYAKYWTR 120
121 FTTSARFINH LFGYLNRYWV KLKNRFTETL VYDIYTLCLV SWHHHVFSHI RDSLLQNLLY 180
181 MFTKKRLYEP TDMKYVEVCV DSITSLSFDK TDMTKPNLSS YKTFFETNFI ENTKNFYAKE 240
241 SSEYLASHSI TDYLKKAEIR LAEEEELVRL YLHESTLKPL LEATEDVLIA QHEEVLHNDF 300
301 ARMLDQNCSE DIIRMYRLMS RTPNGLQPLR QTFEEFVKRS GFAAVAKIVP QVGGEADVDP 360
361 KEYMEMLLST YKASKELVNT AFHGDTDFTK SLDTAFRELV NRNVVCQRSS SRSPELLAKY 420
421 ADSILRKSNK NVDIDDVEDC LSSIIIIFRY VEDKDVFQNF YTKLLAKRLV NGTSNSQDAE 480
481 SSMLSKLKEV CGFEYTSKLQ RMFQDISLSQ EITEAFWQLP QSRAGNIDFS ALVLGTSFWP 540
541 LSPNNVNFHL PEELVPLYEG FQNYYYSCHN GRKLSWLFHL SKGEIKARIN PQTNVTYVFQ 600
601 VSTYQMGVLL LYNHRDSYTY EELAKITGLS TDFLTGILNI FLKAKVLLLG DNDKLGDPNS 660
661 TYKINENFRM KKIRVQLNLP IRSEQKQESL ETHKTIEEDR KLLLQSAIVR IMKARRTLKH 720
721 VVLVKETIDQ IKSRFTPKVS DIKQCIDMLI EKEYLERQGR DEYIYLA
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1u6gA |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.47178230940453 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.15192834197166 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.12051073361876 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 6.87003086224111 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 6.55844152294696 | bayes_pls_golite062009 |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| transcription repressor activity | 3.85678231380989 | bayes_pls_golite062009 |
| ligase activity | 3.66453881539688 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| binding | 2.3219000606044 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21939548334548 | bayes_pls_golite062009 |
| protein binding | 2.20237620151495 | bayes_pls_golite062009 |
| DNA binding | 2.06132216820898 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.33374581364046 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.96257232341735 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| DNA replication origin binding | 0.71823621709622 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.697234220778482 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.322180400748724 | bayes_pls_golite062009 |
| DNA helicase activity | 0.300899564141452 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.286130392009263 | bayes_pls_golite062009 |
| structural molecule activity | 0.272316540117209 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.257777071965243 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| catalytic activity | 0.201606344181603 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.175575779922515 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0912115683429473 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
