| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Sir4. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 6 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear telomeric heterochromatin | 1.6845E-8 | 6 | 7 | 3 | 6292 |
| telomeric heterochromatin | 1.6845E-8 | 6 | 7 | 3 | 6292 |
| nuclear heterochromatin | 1.6845E-8 | 6 | 7 | 3 | 6292 |
| heterochromatin | 1.6845E-8 | 6 | 7 | 3 | 6292 |
| chromatin silencing complex | 4.0399E-8 | 6 | 9 | 3 | 6292 |
| telomere cap complex | 7.9298E-8 | 6 | 11 | 3 | 6292 |
| nuclear telomere cap complex | 7.9298E-8 | 6 | 11 | 3 | 6292 |
| nuclear chromosome, telomeric region | 8.4748E-7 | 6 | 23 | 3 | 6292 |
| chromosome, telomeric region | 1.3977E-6 | 6 | 27 | 3 | 6292 |
| protein-DNA complex | 1.3832E-5 | 6 | 57 | 3 | 6292 |
| nuclear chromatin | 2.9233E-5 | 6 | 73 | 3 | 6292 |
| chromatin | 3.4332E-5 | 6 | 77 | 3 | 6292 |
| chromatin remodeling complex | 7.3032E-5 | 6 | 99 | 3 | 6292 |
| nuclear chromosome part | 5.0688E-4 | 6 | 190 | 3 | 6292 |
| nuclear chromosome | 8.6609E-4 | 6 | 228 | 3 | 6292 |
| chromosomal part | 9.7004E-4 | 6 | 237 | 3 | 6292 |
| chromosome | 1.4813E-3 | 6 | 274 | 3 | 6292 |
| RENT complex | 3.8098E-3 | 6 | 4 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of chromatin | 7.579E-7 | 6 | 2 | 2 | 6292 |
| histone binding | 6.8619E-5 | 6 | 14 | 2 | 6292 |
| phosphomannomutase activity | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| histone deacetylase activity (H3-K14 specific) | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| histone deacetylase activity (H3-K9 specific) | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| NAD-dependent histone deacetylase activity (H3-K9 specific) | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| NAD-dependent histone deacetylase activity (H3-K14 specific) | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| NAD-dependent histone deacetylase activity (H4-K16 specific) | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| proteasome activator activity | 1.9064E-3 | 6 | 2 | 1 | 6292 |
| proteasome regulator activity | 1.9064E-3 | 6 | 2 | 1 | 6292 |
| intramolecular transferase activity, phosphotransferases | 6.6592E-3 | 6 | 7 | 1 | 6292 |
| protein transmembrane transporter activity | 8.5551E-3 | 6 | 9 | 1 | 6292 |
| macromolecule transmembrane transporter activity | 8.5551E-3 | 6 | 9 | 1 | 6292 |
| NAD-dependent protein deacetylase activity | 8.5551E-3 | 6 | 9 | 1 | 6292 |
| NAD-dependent histone deacetylase activity | 8.5551E-3 | 6 | 9 | 1 | 6292 |