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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rad24. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA replication factor C complex 7.5736E-11 6 11 4 6292
replication fork 2.5486E-8 6 42 4 6292
chromosomal part 2.7744E-5 6 237 4 6292
chromosome 4.9256E-5 6 274 4 6292
intracellular non-membrane-bounded organelle 6.2191E-3 6 959 4 6292
non-membrane-bounded organelle 6.2191E-3 6 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

leading strand elongation 2.1836E-7 6 15 3 6292
mismatch repair 1.3977E-6 6 27 3 6292
DNA strand elongation 2.1448E-6 6 31 3 6292
DNA strand elongation involved in DNA replication 2.1448E-6 6 31 3 6292
sister chromatid cohesion 2.3659E-6 6 32 3 6292
DNA repair 1.2019E-5 6 192 4 6292
response to stress 1.6929E-5 6 497 5 6292
response to DNA damage stimulus 2.7283E-5 6 236 4 6292
DNA-dependent DNA replication 4.1489E-5 6 82 3 6292
cellular response to stress 6.1624E-5 6 290 4 6292
DNA replication 1.3969E-4 6 123 3 6292
response to stimulus 1.4262E-4 6 766 5 6292
chromosome segregation 1.5729E-4 6 128 3 6292
cellular response to stimulus 1.7644E-4 6 379 4 6292
cell cycle process 4.8022E-4 6 490 4 6292
cell cycle 6.2738E-4 6 525 4 6292
DNA metabolic process 9.5262E-4 6 585 4 6292
cell cycle checkpoint 1.2234E-3 6 58 2 6292
regulation of cell cycle 6.1086E-3 6 131 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA clamp loader activity 8.0408E-12 6 7 4 6292
protein-DNA loading ATPase activity 8.0408E-12 6 7 4 6292
DNA-dependent ATPase activity 7.7398E-8 6 55 4 6292
ATPase activity 2.3635E-7 6 211 5 6292
nucleoside-triphosphatase activity 2.1805E-6 6 329 5 6292
hydrolase activity, acting on acid anhydrides 3.0968E-6 6 353 5 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.0968E-6 6 353 5 6292
pyrophosphatase activity 3.0968E-6 6 353 5 6292
ATPase activity, coupled 4.3682E-6 6 149 4 6292
DNA binding 3.7653E-5 6 256 4 6292
hydrolase activity 3.3278E-4 6 911 5 6292
nucleic acid binding 1.5669E-3 6 666 4 6292
binding 1.819E-3 6 1294 5 6292
chaperone activator activity 2.8585E-3 6 3 1 6292
ATPase activator activity 6.6592E-3 6 7 1 6292

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