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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Cic1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 9.029E-9 7 211 6 6292
organelle lumen 1.3579E-7 7 660 7 6292
intracellular organelle lumen 1.3579E-7 7 660 7 6292
membrane-enclosed lumen 2.0537E-7 7 700 7 6292
nuclear lumen 8.8765E-7 7 453 6 6292
non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
intracellular non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
nuclear part 1.7083E-4 7 1103 6 6292
intracellular organelle part 8.2061E-4 7 2282 7 6292
organelle part 8.2061E-4 7 2282 7 6292
nucleolar part 1.0268E-3 7 45 2 6292
box C/D snoRNP complex 2.224E-3 7 2 1 6292
Noc2p-Noc3p complex 2.224E-3 7 2 1 6292
Noc1p-Noc2p complex 2.224E-3 7 2 1 6292
Noc complex 5.552E-3 7 5 1 6292
nucleus 5.8629E-3 7 2041 6 6292
preribosome, large subunit precursor 9.9746E-3 7 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 1.7714E-7 7 346 6 6292
ribonucleoprotein complex biogenesis 2.8234E-7 7 374 6 6292
rRNA processing 5.4565E-6 7 128 4 6292
rRNA metabolic process 7.1582E-6 7 137 4 6292
cellular component biogenesis 1.1204E-5 7 694 6 6292
RNA processing 1.4865E-5 7 380 5 6292
ncRNA processing 4.2803E-5 7 215 4 6292
ncRNA metabolic process 8.6358E-5 7 257 4 6292
RNA metabolic process 1.2754E-3 7 954 5 6292
ribosome assembly 2.0698E-3 7 64 2 6292
ribosomal large subunit biogenesis 2.1344E-3 7 65 2 6292
organelle assembly 2.4022E-3 7 69 2 6292
ribonucleoprotein complex assembly 4.2342E-3 7 92 2 6292
gene expression 5.0816E-3 7 1283 5 6292
nucleic acid metabolic process 7.9545E-3 7 1415 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATP-dependent RNA helicase activity 3.9559E-4 7 28 2 6292
RNA-dependent ATPase activity 4.2467E-4 7 29 2 6292
RNA helicase activity 8.9439E-4 7 42 2 6292
ATP-dependent helicase activity 1.168E-3 7 48 2 6292
purine NTP-dependent helicase activity 1.168E-3 7 48 2 6292
helicase activity 3.4587E-3 7 83 2 6292

YRC Informatics Platform - Version 3.0
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