| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Skp1. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 8 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ubiquitin ligase complex | 1.9655E-12 | 8 | 43 | 6 | 6292 |
| SCF ubiquitin ligase complex | 3.528E-10 | 8 | 11 | 4 | 6292 |
| cullin-RING ubiquitin ligase complex | 1.0685E-9 | 8 | 14 | 4 | 6292 |
| protein complex | 6.9038E-4 | 8 | 1137 | 6 | 6292 |
| nuclear SCF ubiquitin ligase complex | 2.5415E-3 | 8 | 2 | 1 | 6292 |
| nuclear matrix | 2.5415E-3 | 8 | 2 | 1 | 6292 |
| nuclear periphery | 2.5415E-3 | 8 | 2 | 1 | 6292 |
| RAVE complex | 3.8101E-3 | 8 | 3 | 1 | 6292 |
| CBF3 complex | 5.0773E-3 | 8 | 4 | 1 | 6292 |
| macromolecular complex | 5.1894E-3 | 8 | 1635 | 6 | 6292 |
| fungal-type vacuole lumen | 8.8705E-3 | 8 | 7 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ubiquitin-protein ligase activity | 4.125E-7 | 8 | 57 | 4 | 6292 |
| small conjugating protein ligase activity | 5.8106E-7 | 8 | 62 | 4 | 6292 |
| acid-amino acid ligase activity | 1.0074E-6 | 8 | 71 | 4 | 6292 |
| ligase activity, forming carbon-nitrogen bonds | 3.1247E-6 | 8 | 94 | 4 | 6292 |
| ligase activity | 2.0169E-5 | 8 | 150 | 4 | 6292 |
| DNA replication origin binding | 1.0958E-4 | 8 | 13 | 2 | 6292 |
| protein binding | 3.7374E-4 | 8 | 612 | 5 | 6292 |
| sequence-specific DNA binding | 1.6809E-3 | 8 | 50 | 2 | 6292 |
| serine-type endopeptidase activity | 5.0773E-3 | 8 | 4 | 1 | 6292 |
| serine-type peptidase activity | 7.6075E-3 | 8 | 6 | 1 | 6292 |