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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 10 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

spliceosomal complex 1.5825E-16 10 45 8 6292
ribonucleoprotein complex 7.3162E-8 10 514 8 6292
nuclear part 2.8079E-5 10 1103 8 6292
nucleus 2.7855E-4 10 2041 9 6292
macromolecular complex 5.4804E-4 10 1635 8 6292
organelle part 7.2492E-4 10 2282 9 6292
intracellular organelle part 7.2492E-4 10 2282 9 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear mRNA splicing, via spliceosome 5.8551E-19 10 99 10 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 6.5056E-19 10 100 10 6292
RNA splicing, via transesterification reactions 1.3205E-18 10 107 10 6292
RNA splicing 1.1728E-17 10 132 10 6292
mRNA processing 6.5852E-17 10 156 10 6292
mRNA metabolic process 1.6065E-15 10 213 10 6292
RNA processing 5.7702E-13 10 380 10 6292
RNA metabolic process 6.1681E-9 10 954 10 6292
gene expression 1.2084E-7 10 1283 10 6292
nucleic acid metabolic process 3.2281E-7 10 1415 10 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 8.9255E-7 10 1566 10 6292
cellular nitrogen compound metabolic process 3.0471E-6 10 1770 10 6292
nitrogen compound metabolic process 3.4296E-6 10 1791 10 6292
cellular macromolecule metabolic process 3.9402E-5 10 2285 10 6292
macromolecule metabolic process 5.1966E-5 10 2349 10 6292
spliceosome assembly 3.4319E-4 10 18 2 6292
primary metabolic process 4.2311E-4 10 2896 10 6292
cellular metabolic process 6.7219E-4 10 3033 10 6292
metabolic process 1.0041E-3 10 3157 10 6292
nuclear mRNA 3'-splice site recognition 3.1764E-3 10 2 1 6292
cis assembly of pre-catalytic spliceosome 3.1764E-3 10 2 1 6292
nuclear mRNA branch site recognition 4.7611E-3 10 3 1 6292
nuclear mRNA cis splicing, via spliceosome 4.7611E-3 10 3 1 6292
ribonucleoprotein complex assembly 8.8178E-3 10 92 2 6292
mRNA splice site selection 9.5019E-3 10 6 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

first spliceosomal transesterification activity 3.399E-5 10 6 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle