| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 8 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase complex | 2.5347E-17 | 8 | 23 | 7 | 6292 |
| chromatin remodeling complex | 1.5229E-12 | 8 | 99 | 7 | 6292 |
| nucleoplasm part | 9.6603E-10 | 8 | 245 | 7 | 6292 |
| nucleoplasm | 1.6353E-9 | 8 | 264 | 7 | 6292 |
| nuclear lumen | 7.205E-8 | 8 | 453 | 7 | 6292 |
| organelle lumen | 9.8757E-7 | 8 | 660 | 7 | 6292 |
| intracellular organelle lumen | 9.8757E-7 | 8 | 660 | 7 | 6292 |
| membrane-enclosed lumen | 1.4845E-6 | 8 | 700 | 7 | 6292 |
| nuclear part | 3.3951E-5 | 8 | 1103 | 7 | 6292 |
| protein complex | 4.178E-5 | 8 | 1137 | 7 | 6292 |
| macromolecular complex | 4.9027E-4 | 8 | 1635 | 7 | 6292 |
| nucleus | 2.1521E-3 | 8 | 2041 | 7 | 6292 |
| organelle part | 4.4856E-3 | 8 | 2282 | 7 | 6292 |
| intracellular organelle part | 4.4856E-3 | 8 | 2282 | 7 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| NAD-independent histone deacetylase activity | 1.4322E-14 | 8 | 7 | 5 | 6292 |
| NAD-dependent protein deacetylase activity | 8.5861E-14 | 8 | 9 | 5 | 6292 |
| NAD-dependent histone deacetylase activity | 8.5861E-14 | 8 | 9 | 5 | 6292 |
| protein deacetylase activity | 1.3597E-10 | 8 | 32 | 5 | 6292 |
| histone deacetylase activity | 1.3597E-10 | 8 | 32 | 5 | 6292 |
| deacetylase activity | 2.1894E-10 | 8 | 35 | 5 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.1488E-9 | 8 | 48 | 5 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.5923E-8 | 8 | 80 | 5 | 6292 |
| transcription repressor activity | 1.303E-3 | 8 | 44 | 2 | 6292 |
| hydrolase activity | 2.4085E-3 | 8 | 911 | 5 | 6292 |