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View Protein Complex Details

Complex Overview

From Publication: Hazbun TR, et al. (2003) Assigning function to yeast proteins by integration of technologies. Mol Cell 12(6):1353-65
Notes: Complex description from publication: 17. YLL034C Organelle organization and biogenesis4
Complex Size: 14 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
AMN1
  • nucleus
  • cellular bud
  • cytoplasm
  • negative regulation of exit from mitosis
  • mitotic cell cycle checkpoint
  • protein binding
  • AXL2
  • integral to plasma membrane
  • cellular bud neck
  • septin ring
  • axial cellular bud site selection
  • cellular bud site selection
  • molecular_function
  • IMH1
  • cytosol
  • Golgi apparatus
  • vesicle-mediated transport
  • Golgi to plasma membrane protein transport
  • molecular_function
  • PEX19
  • cytosol
  • protein targeting to peroxisome
  • protein import into peroxisome membrane
  • peroxisome organization
  • protein folding
  • protein binding
  • PFK27
  • cytoplasm
  • fructose 2,6-bisphosphate metabolic process
  • regulation of glycolysis
  • 6-phosphofructo-2-kinase activity
  • RAX2
  • cellular bud neck
  • mitochondrion
  • membrane
  • cellular bud scar
  • cellular bud site selection
  • molecular_function
  • RGT2
  • plasma membrane
  • response to glucose stimulus
  • signal transduction
  • glucose binding
  • receptor activity
  • glucose transmembrane transporter activity
  • RIC1
  • nucleus
  • Golgi membrane
  • guanyl-nucleotide exchange factor complex
  • intracellular protein transport
  • retrograde transport, endosome to Golgi
  • guanyl-nucleotide exchange factor activity
  • RIX7
  • nucleus
  • nucleolus
  • ribosomal large subunit export from nucleus
  • ATPase activity
  • RPA190
  • DNA-directed RNA polymerase I complex
  • transcription from RNA polymerase I promoter
  • DNA-directed RNA polymerase activity
  • SST2
  • plasma membrane
  • signal transduction
  • adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion
  • GTPase activator activity
  • TRX1
  • cytosol
  • fungal-type vacuole
  • vacuole inheritance
  • response to oxidative stress
  • ER to Golgi vesicle-mediated transport
  • retrograde vesicle-mediated transport, Golgi to ER
  • DNA-dependent DNA replication
  • vacuole fusion, non-autophagic
  • sulfate assimilation
  • thiol-disulfide exchange intermediate activity
  • TRX2
  • cytosol
  • fungal-type vacuole
  • vacuole inheritance
  • response to oxidative stress
  • ER to Golgi vesicle-mediated transport
  • retrograde vesicle-mediated transport, Golgi to ER
  • DNA-dependent DNA replication
  • vacuole fusion, non-autophagic
  • sulfate assimilation
  • thiol-disulfide exchange intermediate activity
  • YLR035C-A
  • retrotransposon nucleocapsid
  • transposition, RNA-mediated
  • RNA binding
  • protein binding
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    cytosol 2.8396E-3 14 284 4 6292
    cellular bud scar 4.4455E-3 14 2 1 6292
    cellular bud 5.2988E-3 14 166 3 6292
    external encapsulating structure part 8.8726E-3 14 4 1 6292
    cell wall part 8.8726E-3 14 4 1 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    sulfate assimilation 2.0481E-4 14 10 2 6292
    vacuole inheritance 4.7486E-4 14 15 2 6292
    intracellular transport 7.2884E-4 14 553 6 6292
    establishment of localization in cell 1.118E-3 14 599 6 6292
    retrograde vesicle-mediated transport, Golgi to ER 1.4494E-3 14 26 2 6292
    vacuole fusion, non-autophagic 1.5634E-3 14 27 2 6292
    cellular localization 1.6274E-3 14 643 6 6292
    organelle inheritance 4.1234E-3 14 44 2 6292
    vacuole organization 4.4999E-3 14 46 2 6292
    vesicle-mediated transport 5.4417E-3 14 340 4 6292
    Golgi vesicle transport 5.4793E-3 14 168 3 6292
    protein import into peroxisome membrane 6.6614E-3 14 3 1 6292
    fructose 2,6-bisphosphate metabolic process 6.6614E-3 14 3 1 6292
    cellular process 7.2188E-3 14 4426 14 6292
    response to chemical stimulus 8.2237E-3 14 382 4 6292
    negative regulation of exit from mitosis 8.8726E-3 14 4 1 6292
    cellular membrane fusion 9.36E-3 14 67 2 6292
    membrane fusion 9.36E-3 14 67 2 6292
    response to oxidative stress 9.9063E-3 14 69 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    thiol-disulfide exchange intermediate activity 1.2776E-4 14 8 2 6292
    glucose binding 4.4455E-3 14 2 1 6292
    6-phosphofructo-2-kinase activity 8.8726E-3 14 4 1 6292
    obsolete_molecular_function 9.9063E-3 14 69 2 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle