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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 270.10.10
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

CBF3 complex 1.5327E-14 4 4 4 6292
kinetochore 7.4742E-9 4 60 4 6292
chromosome, centromeric region 1.1748E-8 4 67 4 6292
condensed nuclear chromosome kinetochore 1.7662E-6 4 49 3 6292
condensed chromosome kinetochore 1.7662E-6 4 49 3 6292
chromosomal part 1.9643E-6 4 237 4 6292
condensed chromosome, centromeric region 2.5132E-6 4 55 3 6292
condensed nuclear chromosome, centromeric region 2.5132E-6 4 55 3 6292
chromosome 3.5214E-6 4 274 4 6292
condensed nuclear chromosome 9.7674E-6 4 86 3 6292
condensed chromosome 1.2781E-5 4 94 3 6292
nuclear chromosome part 1.0604E-4 4 190 3 6292
nuclear chromosome 1.8288E-4 4 228 3 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
protein complex 1.0617E-3 4 1137 4 6292
RAVE complex 1.9063E-3 4 3 1 6292
spindle midzone 4.4437E-3 4 7 1 6292
macromolecular complex 4.5471E-3 4 1635 4 6292
SCF ubiquitin ligase complex 6.9763E-3 4 11 1 6292
cullin-RING ubiquitin ligase complex 8.8726E-3 4 14 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

centromere complex assembly 9.0929E-7 4 3 2 6292
kinetochore assembly 9.0929E-7 4 3 2 6292
kinetochore organization 9.0929E-7 4 3 2 6292
protein-DNA complex assembly 2.2288E-4 4 39 2 6292
mitotic cell cycle 2.5535E-4 4 255 3 6292
M phase 3.9009E-4 4 294 3 6292
cellular protein complex assembly 4.2906E-4 4 54 2 6292
organelle assembly 7.0115E-4 4 69 2 6292
regulation of mitotic cell cycle 7.4238E-4 4 71 2 6292
cell cycle phase 8.0953E-4 4 376 3 6292
regulation of cellular component organization 8.2831E-4 4 75 2 6292
regulation of cell cycle process 9.6587E-4 4 81 2 6292
organelle organization 1.0248E-3 4 1127 4 6292
cell cycle process 1.7695E-3 4 490 3 6292
cell cycle 2.1676E-3 4 525 3 6292
M phase of mitotic cell cycle 2.3988E-3 4 128 2 6292
regulation of cell cycle 2.5114E-3 4 131 2 6292
protein complex biogenesis 3.5019E-3 4 155 2 6292
protein complex assembly 3.5019E-3 4 155 2 6292
cellular component organization 3.9851E-3 4 1582 4 6292
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 4.4437E-3 4 7 1 6292
protein neddylation 4.4437E-3 4 7 1 6292
cellular macromolecular complex assembly 4.8049E-3 4 182 2 6292
protein ubiquitination during ubiquitin-dependent protein catabolic process 6.9763E-3 4 11 1 6292
regulation of protein complex assembly 6.9763E-3 4 11 1 6292
cellular macromolecular complex subunit organization 9.5855E-3 4 259 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sequence-specific DNA binding 3.5299E-9 4 50 4 6292
centromeric DNA binding 5.3949E-9 4 8 3 6292
DNA bending activity 2.7536E-8 4 13 3 6292
DNA binding 2.6791E-6 4 256 4 6292
nucleic acid binding 1.2452E-4 4 666 4 6292
binding 1.7823E-3 4 1294 4 6292
DNA replication origin binding 8.2408E-3 4 13 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle