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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
intracellular non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
box H/ACA snoRNP complex 2.224E-3 7 2 1 6292
cytosolic ribosome 5.0837E-3 7 101 2 6292
cytosolic part 7.3476E-3 7 122 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

negative regulation of programmed cell death 1.1125E-3 7 1 1 6292
anti-apoptosis 1.1125E-3 7 1 1 6292
negative regulation of cell death 1.1125E-3 7 1 1 6292
negative regulation of apoptosis 1.1125E-3 7 1 1 6292
regulation of programmed cell death 4.4437E-3 7 4 1 6292
rRNA pseudouridine synthesis 4.4437E-3 7 4 1 6292
regulation of apoptosis 4.4437E-3 7 4 1 6292
regulation of cell death 4.4437E-3 7 4 1 6292
ribosome biogenesis 4.8878E-3 7 346 3 6292
ribonucleoprotein complex biogenesis 6.0923E-3 7 374 3 6292
translation 6.1847E-3 7 376 3 6292
pseudouridine synthesis 9.9746E-3 7 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleic acid binding 3.3506E-3 7 666 4 6292
binding 5.2851E-3 7 1294 5 6292
pseudouridylate synthase activity 5.552E-3 7 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle