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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex 1.2617E-3 7 514 4 6292
nuclear outer membrane 3.7089E-3 7 86 2 6292
nuclear membrane 4.6971E-3 7 97 2 6292
cytosolic ribosome 5.0837E-3 7 101 2 6292
cytosolic part 7.3476E-3 7 122 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTP biosynthetic process 2.224E-3 7 2 1 6292
primary metabolic process 4.3588E-3 7 2896 7 6292
gene expression 5.0816E-3 7 1283 5 6292
regulation of transcription, mating-type specific 5.552E-3 7 5 1 6292
cellular metabolic process 6.026E-3 7 3033 7 6292
translation 6.1847E-3 7 376 3 6292
traversing start control point of mitotic cell cycle 6.6592E-3 7 6 1 6292
GTP metabolic process 7.7654E-3 7 7 1 6292
response to exogenous dsRNA 7.7654E-3 7 7 1 6292
response to dsRNA 7.7654E-3 7 7 1 6292
metabolic process 7.9792E-3 7 3157 7 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleic acid binding 2.2923E-4 7 666 5 6292
RNA binding 3.4624E-4 7 367 4 6292
5'-3' exoribonuclease activity 2.224E-3 7 2 1 6292
IMP dehydrogenase activity 3.3344E-3 7 3 1 6292
recombinase activity 4.4437E-3 7 4 1 6292
binding 5.2851E-3 7 1294 5 6292
5'-3' exonuclease activity 6.6592E-3 7 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle