YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 5.0837E-3 7 101 2 6292
cytosolic part 7.3476E-3 7 122 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 3.8026E-4 7 376 4 6292
ribosomal large subunit assembly 8.5225E-4 7 41 2 6292
ribosomal subunit assembly 1.532E-3 7 55 2 6292
ribosome assembly 2.0698E-3 7 64 2 6292
ribosomal large subunit biogenesis 2.1344E-3 7 65 2 6292
GTP biosynthetic process 2.224E-3 7 2 1 6292
organelle assembly 2.4022E-3 7 69 2 6292
ribonucleoprotein complex assembly 4.2342E-3 7 92 2 6292
ribosome biogenesis 4.8878E-3 7 346 3 6292
gene expression 5.0816E-3 7 1283 5 6292
ribonucleoprotein complex biogenesis 6.0923E-3 7 374 3 6292
GTP metabolic process 7.7654E-3 7 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleic acid binding 8.7797E-6 7 666 6 6292
RNA binding 1.2524E-5 7 367 5 6292
rRNA binding 1.2639E-4 7 16 2 6292
binding 4.326E-4 7 1294 6 6292
7S RNA binding 1.1125E-3 7 1 1 6292
structural constituent of ribosome 1.194E-3 7 212 3 6292
5S rRNA binding 2.224E-3 7 2 1 6292
IMP dehydrogenase activity 3.3344E-3 7 3 1 6292
structural molecule activity 4.6122E-3 7 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle