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Protein Overview: YPL066W

General Information:
Name(s) found: YPL066W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the bud neck and cytoplasm; null mutant is viable and exhibits growth defect on a non-fermentable (respiratory) carbon source [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 479 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    cellular bud neck [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHPVISLKP SYNSVIRGCP GLPDTLPRIE CQLRVRSNNS LPFKLVKIEI VLKTIEIYFN  60
   61 KNLYSSNNSS FTPFNRPSDP SNGHSDTSNQ NISIHYKKNI VLSHPTHDGD DLNNDLIGID 120
  121 IPLTIGLPDD IKETNYNPKF GKTQTFLDCT VFYTEVGGGS SNKKRNFLYP VNVERYTYLP 180
  181 SPSYFRPINR SNITSPDQKF LISYSIENPC VSMNNDTLKL SISIRLNPFP NNATTPSSND 240
  241 FDVSTPTLFS TKKKFKSKLK LKSITTQILE YLEILKNQSE FSSTQTTNIL QTSVRQVDQI 300
  301 ISMNSMIFQF NLKIFTKDKI LQSFRSSESS CPETKVLINK IDDIPLQYHS SITTIGQHFN 360
  361 VSHYLSIRFK FNKSLKNFEI NHPLIISFWS VSQLPLIENL ILQERQTAKF AKKFYKNFGR 420
  421 IKNTSNNNNS SNCLEYPSLP PIIYNFNDPE TNNRFNILYS QKDPSRTDPS KLRRVPVIQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) TUS1 YPL066W
    View Details Krogan NJ, et al. (2006) TUS1 YPL066W
    View Details Gavin AC, et al. (2002) ACK1 IPP1 PPA2 PRP43 ROM2 TUS1 YPL066W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YKL036C YPL066W 2 Unpublished Fields Lab Data
    View Screen SGT1 YPL066W 2 Unpublished Fields Lab Data
    View Screen PRE2 YPL066W 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YPL066W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..479] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.572240309277483 bayes_pls_golite062009
  • protein binding
    		•  0.192799290516878 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle