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Protein Overview: YRR1

General Information:
Name(s) found: YRR1 / YOR162C [SGD]
Description(s) found:
Found 28 descriptions.
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  • Zn2-Cys6 zinc-finger transcription factor that activates genes involved in multidrug resistance; paralog of Yrm1p, acting on an overlapping set of target genes [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 810 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IPILink to PubMed article]
    Biological Process: drug transmembrane transport [IMPLink to PubMed article][IPILink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IMPLink to PubMed article]
    Molecular Function: specific RNA polymerase II transcription factor activity [IMPLink to PubMed article][IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRSDALLG SFQATNVTPP SDNSNSTAGG ANGSNSGTPT STSGKKRNKL IKSCGFCRRR  60
   61 KLRCDQQKPM CSTCISRNLT TCQYAEEFNK NIEKKATYGP YPNADLLKKV EELENKIRIL 120
  121 EAEKNTNSSA SSMYTSPNFP PLGTSVGRGS TETSSPLPDG VINPYADRYY LQSKHSGRST 180
  181 LYGPTSMRTQ IANSNWGFIE KYKQLWAKVK VERNKWKQNN QKTMCRELGL LDESDWQPDP 240
  241 LIKQICRFLP SYNKALSILD DFFNDGACNE INVILDKAKV RRDFLDYFMP EKEVKAEGDR 300
  301 SIVYILSNPK KNYYKAAVIL LILCLKYFHT DVPTPIEKFF TLLKGASTAK VFYIERAQML 360
  361 ILFYYHRETY SFGGDGSDLV NINECLVTTV TTIGLHLNIR ETFKEHEVFM GSIESLENVW 420
  421 LMAIFIDYNI SCNVGRPLLI NKFYLDENQD HCILNSKSKT YEGKLKRYLK LTRPMLLTLY 480
  481 DRDKFPDLKA YSKRIINFVE EELGPLGHYT GENISEEVPL RESRILSMAV GLLLSFYALI 540
  541 HSVLKVRNIE SKNNTFQLVL INFSIIVNTT IRCYRIDKAL YPEKFEASNP HLPPHMALSM 600
  601 SLTAGLFSKT LVFFCSLIYF KLTLFENGLC LSNDMEVGWS DLTKLTVPLD KDLSLGTAMS 660
  661 LYSSIFDRLF TVGNKELIRT MHRSSQFVIE LAIERTYRTI LGNVIEFRKL TEETWLAQIK 720
  721 QELDPQSDNP SSEAKIVSDR QRDLSLAVPT PTPSIIPMLP SPGETKNHAK SQSEIIQMLT 780
  781 DEFWANYNSG WEELINQSEF STLFDDYKDN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) CDC55 FIR1 PHR1 PPH21 PPH22 RRD2 TPD3 YRR1 ZDS1 ZDS2

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen PSF1 YRR1 2 Hazbun TR, et al. (2003)
    View Screen UBC7 YRR1 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YRR1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] PSI-BLAST 67.315398 Hap1 (Cyp1); HAP1
    2 View Details [142..249] deduced N/A No confident structure predictions are available.
    3 View Details [250..581] MSA 6.112984 View MSA. No confident structure predictions are available.
    4 View Details [582..810] MSA 1.041912 View MSA. No confident structure predictions are available.
    5 View Details [589..810] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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