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Protein Overview: TMN3

General Information:
Name(s) found: TMN3 / YER113C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Protein with a role in cellular adhesion and filamentous growth; similar to Emp70p and Tmn2p; member of Transmembrane Nine family with 9 transmembrane segments; localizes to Golgi; induced by 8-methoxypsoralen plus UVA irradiation [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 706 amino acids

    Gene Ontology:
    Cellular Component: Golgi apparatus [IDALink to PubMed article]
    COPI-coated vesicle [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRPKRSVI TLMAIVVVML ILRNQFYSSR TRGHGQEPVI SSSQKNLYDG WITPNFYRKG  60
   61 DPLELIVNKV ESDLTQLPYA YYDLPFTCPP TMHKKPLHLS LNEIIRGDRK WESDYKLKFG 120
  121 EDNPCETLCA RKTTKEGMQT LDKLVREGYV VQWLIDDELP AATTFISTTD HKKYYASGFP 180
  181 LGFIDPDTDK TYLHNHVMLV IRFHASDNDK NTIVGFEVYP RSVSDYHCPG ASKNYEQYEI 240
  241 VIPEDENELT YLPFTYSVYW REEFEVDWNH RWDYFLNAGE LSDEQSIQFH WMSLANSVGI 300
  301 VLSISFITLI IYVRVMYTDK SNSKSPKYMI NIEGIETEDD LDDDKYGKYS VYTVAKDWIQ 360
  361 NGRPNLFGLK VLILLVSFGV QFLFTIIGSL TISCSMNKLH NVRNSVLTMA ILFFVLGAFM 420
  421 ASFVGTRLSM VTKTKRTKAN YLDDNRYLKD YKKFSPIFTI LCGSSLPGIV MVSTFLLNSI 480
  481 VWAHDSTSAL PFKTIVFFMS IYFIVCIPLS LFGGIVANNI PLPQYWLSGI TKDESNSDGN 540
  541 GLFVPKSRAK FNPLVYCGIY LCGIFPLLVI YVEMQYVYKS LWLEKTTFYY FYGFLFLSII 600
  601 LLCVLTMEIS IIGSYLLMRF CFEDKVVRNN WRWKCFEMGF SGGVYMELYS LYYIFAVLNI 660
  661 HGFSSILISI CYSLIFNVMC SLGLGALSYL TASWFINKIY HQKVNL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) TMN3 VRG4

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data TMN3 Huh WK, et al. (2003)
    View Data TMN3 and COP1 Huh WK, et al. (2003)
    View Data TMN3 and ANP1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..59] deduced N/A No confident structure predictions are available.
    2 View Details [60..706] Pfam 293.744727 Endomembrane protein 70 No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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