| Protein: | TMN3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 706 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMN3.
| Description | E-value | Query Range |
Subject Range |
|
|
787.0 | [0..45] | [704..26] |
|
|
754.0 | [0..45] | [704..33] |
|
|
736.0 | [0..43] | [704..163] |
|
|
734.0 | [0..46] | [704..34] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MRVRPKRSVI TLMAIVVVML ILRNQFYSSR TRGHGQEPVI SSSQKNLYDG WITPNFYRK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [60-706] |
1 11 21 31 41 51
| | | | | |
1 GDPLELIVNK VESDLTQLPY AYYDLPFTCP PTMHKKPLHL SLNEIIRGDR KWESDYKLKF 60
61 GEDNPCETLC ARKTTKEGMQ TLDKLVREGY VVQWLIDDEL PAATTFISTT DHKKYYASGF 120
121 PLGFIDPDTD KTYLHNHVML VIRFHASDND KNTIVGFEVY PRSVSDYHCP GASKNYEQYE 180
181 IVIPEDENEL TYLPFTYSVY WREEFEVDWN HRWDYFLNAG ELSDEQSIQF HWMSLANSVG 240
241 IVLSISFITL IIYVRVMYTD KSNSKSPKYM INIEGIETED DLDDDKYGKY SVYTVAKDWI 300
301 QNGRPNLFGL KVLILLVSFG VQFLFTIIGS LTISCSMNKL HNVRNSVLTM AILFFVLGAF 360
361 MASFVGTRLS MVTKTKRTKA NYLDDNRYLK DYKKFSPIFT ILCGSSLPGI VMVSTFLLNS 420
421 IVWAHDSTSA LPFKTIVFFM SIYFIVCIPL SLFGGIVANN IPLPQYWLSG ITKDESNSDG 480
481 NGLFVPKSRA KFNPLVYCGI YLCGIFPLLV IYVEMQYVYK SLWLEKTTFY YFYGFLFLSI 540
541 ILLCVLTMEI SIIGSYLLMR FCFEDKVVRN NWRWKCFEMG FSGGVYMELY SLYYIFAVLN 600
601 IHGFSSILIS ICYSLIFNVM CSLGLGALSY LTASWFINKI YHQKVNL
|
| Detection Method: | |
| Confidence: | 293.744727 |
| Match: | PF02990 |
| Description: | Endomembrane protein 70 |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
