| Protein: | TMN3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 706 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMN3.
| Description | E-value | Query Range |
Subject Range |
|
|
787.0 | [0..45] | [704..26] |
|
|
754.0 | [0..45] | [704..33] |
|
|
736.0 | [0..43] | [704..163] |
|
|
734.0 | [0..46] | [704..34] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MRVRPKRSVI TLMAIVVVML ILRNQFYSSR TRGHGQEPVI SSSQKNLYDG WITPNFYRK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.528 | a.30.5 | Description not found. |
| View | Download | 0.352 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.352 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.339 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.321 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.313 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.313 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.310 | a.2.7 | tRNA-binding arm |
| View | Download | 0.310 | a.2.7 | tRNA-binding arm |
|
Region A: Residues: [60-706] |
1 11 21 31 41 51
| | | | | |
1 GDPLELIVNK VESDLTQLPY AYYDLPFTCP PTMHKKPLHL SLNEIIRGDR KWESDYKLKF 60
61 GEDNPCETLC ARKTTKEGMQ TLDKLVREGY VVQWLIDDEL PAATTFISTT DHKKYYASGF 120
121 PLGFIDPDTD KTYLHNHVML VIRFHASDND KNTIVGFEVY PRSVSDYHCP GASKNYEQYE 180
181 IVIPEDENEL TYLPFTYSVY WREEFEVDWN HRWDYFLNAG ELSDEQSIQF HWMSLANSVG 240
241 IVLSISFITL IIYVRVMYTD KSNSKSPKYM INIEGIETED DLDDDKYGKY SVYTVAKDWI 300
301 QNGRPNLFGL KVLILLVSFG VQFLFTIIGS LTISCSMNKL HNVRNSVLTM AILFFVLGAF 360
361 MASFVGTRLS MVTKTKRTKA NYLDDNRYLK DYKKFSPIFT ILCGSSLPGI VMVSTFLLNS 420
421 IVWAHDSTSA LPFKTIVFFM SIYFIVCIPL SLFGGIVANN IPLPQYWLSG ITKDESNSDG 480
481 NGLFVPKSRA KFNPLVYCGI YLCGIFPLLV IYVEMQYVYK SLWLEKTTFY YFYGFLFLSI 540
541 ILLCVLTMEI SIIGSYLLMR FCFEDKVVRN NWRWKCFEMG FSGGVYMELY SLYYIFAVLN 600
601 IHGFSSILIS ICYSLIFNVM CSLGLGALSY LTASWFINKI YHQKVNL
|
| Detection Method: | |
| Confidence: | 293.744727 |
| Match: | PF02990 |
| Description: | Endomembrane protein 70 |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
