Protein Overview: BABA1_RAT

General Information:
Name(s) found:	BABA1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81883789\|sp\|Q5XIJ6.1\|MRI40_RAT RecName: Full=BRCA1-A complex subunit MERIT40; AltName: Full=Mediator of RAP80 interactions and targeting subunit of 40 kDa; AltName: Full=New component of the BRCA1-A complex [NCBI NR] gi\|55741534\|ref\|NP_001006965.1\| hypothetical protein LOC290631 [Rattus norvegicus] [NCBI NR] gi\|53733966\|gb\|AAH83685.1\| Similar to RIKEN cDNA 5430437P03 [Rattus norvegicus] [NCBI NR] ref\|XP_214301.2\| similar to RIKEN cDNA 5430437P03 [Rattus norvegicus] [NCBI NR] gi\|149036137\|gb\|EDL90803.1\| similar to RIKEN cDNA 5430437P03, isoform CRA_b [Rattus norvegicus] [NCBI NR] BRCA1-A complex subunit MERIT40 OS=Rattus norvegicus GN=Merit40 PE=2 SV=1 [Swiss-Prot] Uncharacterized protein C19orf62 homolog OS=Rattus norvegicus PE=2 SV=1 [Swiss-Prot] BRISC and BRCA1-A complex member 1 OS=Rattus norvegicus GN=Babam1 PE=1 SV=1 [Swiss-Prot] similar to RIKEN cDNA 5430437P03 [HMR_022704-rand.fasta] similar to RIKEN cDNA 5430437P03 [Rattus norvegicus]gi\|53733966\|gb\|AAH83685.1\| MGC94542 protein [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Similar to RIKEN cDNA 5430437P03 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Uncharacterized protein C19orf62 homolog [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] similar to RIKEN cDNA 5430437P03, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] hypothetical protein LOC290631 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Similar to RIKEN cDNA 5430437P03 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=MGC94542 Uncharacterized protein C19orf62 homolog [rat-ipi-250309-contam.fasta] BRCA1-A complex subunit MERIT40 [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] BRCA1-A complex subunit MERIT40 OS=Rattus norvegicus GN=Merit40 [011711_HMR.fasta] BRISC and BRCA1-A complex member 1 OS=Rattus norvegicus GN=Babam1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] BRISC and BRCA1-A complex member 1 OS=Rattus norvegicus GN=Babam1 [120808_122_R_norvegicus.fasta]
Organism:	Rattus norvegicus
Length:	334 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][ISS] cytoplasm [UNKNOWN][ISS] BRISC complex [UNKNOWN][ISS] BRCA1-A complex [UNKNOWN][ISS]
Biological Process:	chromatin modification [IEA] positive regulation of DNA repair [UNKNOWN][ISS] G2/M transition DNA damage checkpoint [UNKNOWN][ISS] double-strand break repair [UNKNOWN][ISS] response to ionizing radiation [UNKNOWN][ISS] protein K63-linked deubiquitination [UNKNOWN][ISS]
Molecular Function:	protein binding [UNKNOWN]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVAEANSPT EEEEEEEEEE GEEPISEPRP HTRSNPEGAE DRAIGAQANV GSRSEGEGEA  60
   61 ATADDGAASV PGAVPKPWQV PAPASEVQIR TPRVNCPEKV IICLDLSEEM SVPKLESFNG 120
  121 SRTNALNVSQ KMVEMFVRTK HKIDKSHEFA LVVVNDDSAW LSGLTSDPRE LCSCLYDLET 180
  181 ASCSTFNLEG LFSLIQQKTE LPVTENVQTI PPPYVVRTIL VYSRPPCQPQ FSLTEPMKKM 240
  241 FQCPYFFFDI IYIHSGPEEK EDDMSWKDMF AFMGSLDTKG TSYKYAVALA GPALELHNCV 300
  301 AKLLAHPLQR PCQSHASYSL LEEDEEAGEG EATV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: BABA1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: