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Protein Overview: EXOS6_MOUSE

General Information:
Name(s) found: EXOS6_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|81875189|sp|Q8BTW3.1|EXOS6_MOUSE RecName: Full=Exosome complex exonuclease MTR3; AltName: Full=mRNA transport regulator 3 homolog; AltName: Full=Exosome component 6 [NCBI NR]
  • gi|30794378|ref|NP_082550.1| exosome component 6 [Mus musculus] [NCBI NR]
  • gi|26353554|dbj|BAC40407.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|111599953|gb|AAI19083.1| Exosome component 6 [Mus musculus] [NCBI NR]
  • gi|109734233|gb|AAI16986.1| Exosome component 6 [Mus musculus] [NCBI NR]
  • Exosome complex component MTR3 OS=Mus musculus GN=Exosc6 PE=1 SV=1 [Swiss-Prot]
  • Mtr3 (mRNA transport regulator 3)-homolog; Mtr3 (mRNA transport regulator 3)-homolog (yeast) [HMR_022704-rand.fasta]
  • Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full- length enriched library, clone:E430019K12 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [ipi.MOUSE.v3.06.fasta]
  • Mtr3 (mRNA transport regulator 3)-homolog [Mus musculus]gi|26353554|dbj|BAC40407.1| unnamed protein product [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019K12 product:hypothetical 3' exoribonuclease family containing protein, full insert sequence [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • Mtr3 (mRNA transport regulator 3)-homolog [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full- length enriched library, clone:E430019K12 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Exosome complex exonuclease MTR3 (mRNA transport regulator 3 homolog) (Exosome component 6) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • exosome component 6 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Exosome component 6 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MUS MUSCULUS 2 DAYS NEONATE THYMUS THYMIC CELLS CDNA, RIKEN FULL- LENGTH ENRICHED LIBRARY, CLONE:E430019K12 PRODUCT:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) HOMOLOG [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Exosc6 Exosome complex exonuclease MTR3 [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Exosc6 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019K12 product:hypothetical 3' exoribonuclease family containing protein, full insert sequence [zeeyong.fasta]
  • exosome complex exonuclease MTR3 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00466593.1|SWISS-PROT:Q8BTW3|ENSEMBL:ENSMUSP00000111863|REFSEQ:NP_082550 Tax_Id=10090 Gene_Symbol=Exosc6 Exosome complex exonuclease MTR3 [ipi.MOUSE.fasta.20090209]
  • Exosome complex exonuclease MTR3 OS=Mus musculus GN=Exosc6 [011711_HMR.fasta]
  • Exosome complex exonuclease MTR3 OS=Mus musculus GN=Exosc6 PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • Exosome complex component MTR3 OS=Mus musculus GN=Exosc6 [122011_mus.fasta]
  • Tax_Id=10090 Gene_Symbol=Exosc6 Exosome complex component MTR3 [EBI-IPI_mouse_2_08-18-2011_reversed.fasta]
  • sp|Q8BTW3|EXOS6_MOUSE Exosome complex component MTR3 OS=Mus musculus GN=Exosc6 PE=1 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    cytoplasm [IEA]
    cellular_component [ND]
    exosome (RNase complex) [IEA]
    Biological Process: biological_process [ND]
    RNA processing [IEA]
    rRNA processing [IEA]
    Molecular Function: 3'-5'-exoribonuclease activity [IEA]
    RNA binding [IEA]
    exonuclease activity [IEA]
    nuclease activity [IEA]
    molecular_function [ND]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGDHRRIRG PEESQPPQLY AAEDDETPAA RDPTRLRPVY ARAGLLSQAK GSAYLEAGGT  60
   61 KVLCAVSGPR QAEGGERGSG PAGAGGEAPA ALRGRLLCDF RRAPFSGRRR RAPQGGGGED 120
  121 RELGLALQEA LEPAVRLGRY PRAQLEVSAL LLEDGGCALA AALTAAALAL ADAGVEMYDL 180
  181 VVGCGLSLTP GPSPTWLLDP TRLEEEHSAA GLTVALMPVL NQVAGLLGSG EGGQTESWTD 240
  241 AVRLGLEGCQ RLYPVLQQCL VRAARRRGAA APP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 44.0 No description for 2nn6F was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.112026646106867 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle