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Protein Overview: cactin-PA

General Information:
Name(s) found: cactin-PA / FBpp0076997 [FlyBase]
Description(s) found:
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  • gi|45549144|ref|NP_523422.3| cactin [Drosophila melanogaster] [NCBI NR]
  • gi|45447076|gb|AAF50904.2| cactin [Drosophila melanogaster] [NCBI NR]
  • The gene cactin is referred to in FlyBase by the symbol Dmel\cactin (CG1676, FBgn0031114). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:20295007..20297439. It has the cytological map location 19D1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: dorsal/ventral axis specification. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • (AAF50904) CG1676-PA [DrosMelano7227.FASTAC.txt]
  • CG1676-PA [Drosophila melanogaster]gi|45549144|ref|NP_523422.3| CG1676-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:20295055..20297343; ID=FBpp0076997; name=cactin-PA; parent=FBgn0031114,FBtr0077305; dbxref=GB_protein:AAF50904.1,GB_protein:AAF50904.2,FlyBase:FBpp0076997,FlyBase_Annotation_IDs:CG1676-PA,REFSEQ:NP_523422,GB_protein:AAF50904; MD5=5c625 [fly-100309-contam.fasta]
  • CG1676-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • cactin CG1676-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:20295055..20297343; ID=FBpp0076997; name=cactin-PA; parent=FBgn0031114,FBtr0077305; dbxref=GB_protein:AAF50904.1,GB_protein:AAF50904.2,FlyBase:FBpp0076997,FlyBase_Annotation_IDs:CG1676-PA,REFSEQ:NP_523422,GB_protein:AAF50904; MD5=5c6251710edbf6749c13d619d1d78427; length=762; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:20295055..20297343; ID=FBpp0076997; name=cactin-PA; parent=FBgn0031114,FBtr0077305; dbxref=GB_protein:AAF50904.1,GB_protein:AAF50904.2,FlyBase:FBpp0076997,FlyBase_Annotation_IDs:CG1676-PA,REFSEQ:NP_523422,GB_protein:AAF50904; MD5=5c6251710edbf6749c13d619d1d78427; length=762; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Cactin OS=Drosophila melanogaster GN=cactin PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:20295055..20297343; ID=FBpp0076997; name=cactin-PA; parent=FBgn0031114,FBtr0077305; dbxref=GB_protein:AAF50904.1,GB_protein:AAF50904.2,FlyBase:FBpp0076997,FlyBase_Annotation_IDs:CG1676-PA,REFSEQ:NP_523422,GB_protein:AAF50904,FlyMine:FBpp0076997,modMine:FBpp0076997; MD5=5c6251710edbf6749c13d619d1d78427; length=762; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Cactin OS=Drosophila melanogaster GN=cactin PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 762 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    Biological Process: signal transduction [NAS]
    dorsal/ventral axis specification [IGI]
    defense response [NAS]
    nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLISIALLQL LVAIWVGFLH LATLALFIFY FTSFIPKNSL KKMPKEKSKH RHRSRSRERR  60
   61 DHRSPDPRSS RNRDRDRERE REKDRDHRDH RDKERDQRRE REKDKSRDKK REHKSRRRRS 120
  121 SSSSSSPSSS TSSSVPGAPR SPLVKSPMKL LQTLEARRLV EQKDRQRKKE ELKAHETPEE 180
  181 KRARRLREKQ AKEQRRRERM GWDNEYQTYS NEDNPFGDSN LTSTFHWGKK LEVEGLSNLS 240
  241 TKTVEVLSLQ KQLENRRELE KVKKRRQERE LERQVREDDL MMQQRAKEAV QFREWQRQED 300
  301 QFHLEQARLR SEIRIRDGRA KPIDLLAQYV AAGNEPLEEC LEMQMHEPYV LLNGLPVEEL 360
  361 EDLLVDIKVY EELEQGKHID FWNDMITIVQ DELQRQQKLE AENSSLNQRR DGIHQAVVKD 420
  421 VADIFRGKNA QQLEEMRHRI EAKISGRADG VDISYWESLL SQLKAHMARA RLRDRHQALL 480
  481 REKLSLLKRE NDNETLQEKV APQVKEEEME TQDAEDPEVE EGSPEDEEDP LNELRKTVRL 540
  541 YQAGNYSPRY IREEDFTGRR AQNEDVDEPE AEGLLYEEED DERRTQRQRL LILHPERVDN 600
  601 NQLTPQELRM RNEAKQGMQG DEAEFSVETT LDAVPQLATD KYRPRKPRYF NRVHTGFEWN 660
  661 KYNQTHYDMD NPPPKIVQGY KFNIFYPDLM DKSQTPQYFL TPCADNGDFA VLRFHTGPPY 720
  721 EDIAFKIVNR EWEFSYKRGF RCQFHNNIFQ LWFHFKRYRY RR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] FFAS03 1.15 No description for 2h8aA was found.
    2 View Details [80..514] PSI-BLAST 10.69897 Heavy meromyosin subfragment
    3 View Details [515..603] deduced N/A No confident structure predictions are available.
    4 View Details [604..762] MSA 2.383929 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.56838161166777 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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