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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cactin-PA
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLISIALLQL LVAIWVGFLH LATLALFIFY FTSFIPKNSL KKMPKEKSKH RHRSRSRERR  60
   61 DHRSPDPRSS RNRDRDRERE REKDRDHRDH RDKERDQRRE REKDKSRDKK REHKSRRRRS 120
  121 SSSSSSPSSS TSSSVPGAPR SPLVKSPMKL LQTLEARRLV EQKDRQRKKE ELKAHETPEE 180
  181 KRARRLREKQ AKEQRRRERM GWDNEYQTYS NEDNPFGDSN LTSTFHWGKK LEVEGLSNLS 240
  241 TKTVEVLSLQ KQLENRRELE KVKKRRQERE LERQVREDDL MMQQRAKEAV QFREWQRQED 300
  301 QFHLEQARLR SEIRIRDGRA KPIDLLAQYV AAGNEPLEEC LEMQMHEPYV LLNGLPVEEL 360
  361 EDLLVDIKVY EELEQGKHID FWNDMITIVQ DELQRQQKLE AENSSLNQRR DGIHQAVVKD 420
  421 VADIFRGKNA QQLEEMRHRI EAKISGRADG VDISYWESLL SQLKAHMARA RLRDRHQALL 480
  481 REKLSLLKRE NDNETLQEKV APQVKEEEME TQDAEDPEVE EGSPEDEEDP LNELRKTVRL 540
  541 YQAGNYSPRY IREEDFTGRR AQNEDVDEPE AEGLLYEEED DERRTQRQRL LILHPERVDN 600
  601 NQLTPQELRM RNEAKQGMQG DEAEFSVETT LDAVPQLATD KYRPRKPRYF NRVHTGFEWN 660
  661 KYNQTHYDMD NPPPKIVQGY KFNIFYPDLM DKSQTPQYFL TPCADNGDFA VLRFHTGPPY 720
  721 EDIAFKIVNR EWEFSYKRGF RCQFHNNIFQ LWFHFKRYRY RR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle