YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YBEY_ECOLI

General Information:
Name(s) found: YBEY_ECOLI [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • pir||A64801 ybeY protein - Escherichia coli (strain K-12) [NCBI NR]
  • gi|62906654|sp|P0A898.1|YBEY_ECOLI RecName: Full=Putative metalloprotease ybeY [NCBI NR]
  • gi|56554603|pdb|1XM5|D Chain D, Crystal Structure Of Metal-Dependent Hydrolase Ybey From E. Coli, Pfam Upf0054 [NCBI NR]
  • gi|56554602|pdb|1XM5|C Chain C, Crystal Structure Of Metal-Dependent Hydrolase Ybey From E. Coli, Pfam Upf0054 [NCBI NR]
  • gi|56554601|pdb|1XM5|B Chain B, Crystal Structure Of Metal-Dependent Hydrolase Ybey From E. Coli, Pfam Upf0054 [NCBI NR]
  • gi|56554600|pdb|1XM5|A Chain A, Crystal Structure Of Metal-Dependent Hydrolase Ybey From E. Coli, Pfam Upf0054 [NCBI NR]
  • gi|209776884|gb|ACI86754.1| hypothetical protein ECs0697 [Escherichia coli] [NCBI NR]
  • gi|209776878|gb|ACI86751.1| hypothetical protein ECs0697 [Escherichia coli] [NCBI NR]
  • gi|1778578|gb|AAB40861.1| HI0004 homolog [Escherichia coli] [NCBI NR]
  • UPF0054 protein ybeY - Escherichia coli [Swiss-Prot]
  • hypothetical protein b0659 [Escherichia coli K12]gi|30062154|ref|NP_836325.1| hypothetical protein S0645 [Shigella flexneri 2a str. 2457T]gi|24112043|ref|NP_706553.1| hypothetical protein SF0623 [Shigella flexneri 2a str. 301]gi|24050866|gb|AAN42260.1| [nrdb_11152004_Chlamydomonas]
  • Putative metalloprotease ybeY [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Chain C, Crystal Structure Of Hypothetical Protein Ybey From Escherichia Coli [nr-271106-contam.fasta]
  • Chain B, Crystal Structure Of Hypothetical Protein Ybey From Escherichia Coli [nr-271106-contam.fasta]
  • Chain A, Crystal Structure Of Hypothetical Protein Ybey From Escherichia Coli [nr-271106-contam.fasta]
  • HI0004 homolog [Escherichia coli] [nr-271106-contam.fasta]
  • Chain D, Crystal Structure Of Hypothetical Protein Ybey From Escherichia Coli [nr-271106-contam.fasta]
  • Probable rRNA maturation factor YbeY OS=Escherichia coli (strain K12) GN=ybeY PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Endoribonuclease YbeY OS=Escherichia coli (strain K12) GN=ybeY PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 155 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQVILDLQL ACEDNSGLPE ESQFQTWLNA VIPQFQEESE VTIRVVDTAE SHSLNLTYRG  60
   61 KDKPTNVLSF PFEVPPGMEM SLLGDLVICR QVVEKEAQEQ GKPLEAHWAH MVVHGSLHLL 120
  121 GYDHIEDDEA EEMEALETEI MLALGYEDPY IAEKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 49.39794 Crystal structure of hypothetical protein ybeY from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  1.82441002770327 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.636735406617 bayes_pls_golite062009
  • metallopeptidase activity
    		•  1.01800186871128 bayes_pls_golite062009
  • catalytic activity
    		•  0.891187593353827 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.781297363942133 bayes_pls_golite062009
  • binding
    		•  0.492746574205109 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  0.282068540258585 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle