General Information: |
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Name(s) found: |
RS40_ARATH
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Arabidopsis thaliana |
Length: | 350 amino acids |
Gene Ontology: |
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Cellular Component: |
nuclear speck
[IDA]
spliceosomal complex [ISS] |
Biological Process: |
RNA splicing
[NAS]
nuclear mRNA splicing, via spliceosome [ISS] |
Molecular Function: |
nucleic acid binding
[IEA]
nucleotide binding [IEA] RNA binding [ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MKPVFCGNFE YDAREGDLER LFRKYGKVER VDMKAGFAFV YMEDERDAED AIRALDRFEF 60 61 GRKGRRLRVE WTKSERGGDK RSGGGSRRSS SSMRPSKTLF VINFDADNTR TRDLEKHFEP 120 121 YGKIVNVRIR RNFAFIQYEA QEDATRALDA SNNSKLMDKV ISVEYAVKDD DARGNGHSPE 180 181 RRRDRSPERR RRSPSPYKRE RGSPDYGRGA SPVAAYRKER TSPDYGRRRS PSPYKKSRRG 240 241 SPEYGRDRRG NDSPRRRERV ASPTKYSRSP NNKRERMSPN HSPFKKESPR NGVGEVESPI 300 301 ERRERSRSSP ENGQVESPGS IGRRDSDGGY DGAESPMQKS RSPRSPPADE |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..173] | 37.522879 | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) | |
2 | View Details | [174..298] | N/A | No confident structure predictions are available. | |
3 | View Details | [299..350] | 11.045757 | poly(A) binding protein |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||
1 |
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2 | No functions predicted. | |||||||||
3 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)